Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1885 ATGGGTAACGAACCTCTCTTACTTCCAGCCCCAACAGCCCCATCAATGAACCCTCCACCACTCACTGTCTCAGTACCATCTGCTTCTGCTTCTGCTTCCGCGGCACCACCAACTTCTCTTGCTCCTGGGTTTAGGTTTCACCCAACTGATGAAGAGCTTGTAATTTATTACCTTAAGCGCAAAGTTTCTGGAAAACCCTTCCGATTTGATGCTATTGCTGAAGTGGATATCTACAAAAGTGAACCCTGGGATTTATTTGATAAGTCAAGGTTGAAGACCAGGGACCAGGAGTGGTATTTTTTCAGTGCATTGGACAAGAAATATGGAAATGGTGGCAGGATGAACAGGGCTACTCTTCAAGGGTACTGGAAAGCTACTGGAAATGATCGTCCGGTGAAGCATGACCAAAGGACTGTAGGGTTGAAGAAAACTTTGGTGTTTCATAGCGGCCGTGCTCCGGATGGTAAGAGAACAAATTGGGTCATGCATGAGTACAGGCTTGTTGAGGAAGAGTTGGAGAGGGAGAGGGCTGGGTCTGGACCCTCTCAACCTCAGGAGGCATTTGTGCTGTGTAGAGTATTTCACAAGAATAATATTGGACCTCCAAATGGACAACGATATGCACCTTTTATTGAAGAAGAGTGGGAAGATGGATTGGGAATGGTTCCTGGGGCTGAGCCTGTGAATAATAATGGTCCTGTTGACCGCCATCTGCGTCTTGAATGGAATGGCGGCGTTTCATGCAGTGAAGGAAGAAATACTGTTGTGCAGGACACTCAGTCCAACAACAAAACTCCACTTGATGTGAACAAGCTACCAATCGAAACTCAAAATCTTCTTGCTGTGTGCAAGAGGGAGAGCATGACTGAGTTTTCATCACCAGAAAAGGATGATTCTAAGCATATGCATGTGGATGATGAGTACCAATTACCCCAAACTGAAAGCCCGAAGCCAATACCAATACCTCAAATTTACAAAAGGCGGCGCTATAACTTGAACTTGAACTCCAATCATTCTAATGTTTCTGGAGATTCATTTCCCAACAGTCAGGATCCTTGCTCGTCCACAGTAACCACTGCAGCGACAACTCTTCCAACAACAGCTGCCGCCGTCACAACTGCCAAACCTGCACCAAAGAAACATTTTCTGTCTGCACTGGTGGAGTTTTCTCTGCTAGAATCACTTGAATCGAAGAAGGAAAACCACACCTTGGTTCAGGCGCCCGAGTTTGACTTGGCGAATCTTGAATCATGTGTCCCTCCGAGTGTTGCAAAGTACATCAAACACTTGCAGAGTGAAACTCAGAAGCTTGGTGTTGAAAAGGAGACAATGCGGTTCGAGTTGACAAGTTCTCAAGCCATGATTAACATTCTCCAGTCCCGCGTTGAAAATCTCAGTAAAGAGAACGAGGAAATGAAGAAGATGATGATGAGAAATCCTTAG 1443 0.4553 MGNEPLLLPAPTAPSMNPPPLTVSVPSASASASAAPPTSLAPGFRFHPTDEELVIYYLKRKVSGKPFRFDAIAEVDIYKSEPWDLFDKSRLKTRDQEWYFFSALDKKYGNGGRMNRATLQGYWKATGNDRPVKHDQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEELERERAGSGPSQPQEAFVLCRVFHKNNIGPPNGQRYAPFIEEEWEDGLGMVPGAEPVNNNGPVDRHLRLEWNGGVSCSEGRNTVVQDTQSNNKTPLDVNKLPIETQNLLAVCKRESMTEFSSPEKDDSKHMHVDDEYQLPQTESPKPIPIPQIYKRRRYNLNLNSNHSNVSGDSFPNSQDPCSSTVTTAATTLPTTAAAVTTAKPAPKKHFLSALVEFSLLESLESKKENHTLVQAPEFDLANLESCVPPSVAKYIKHLQSETQKLGVEKETMRFELTSSQAMINILQSRVENLSKENEEMKKMMMRNP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1885 480 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 32 476 - -
Mal1g1885 480 ProSiteProfiles NAC domain profile. 40 196 IPR003441 GO:0003677|GO:0006355
Mal1g1885 480 Coils Coil 448 475 - -
Mal1g1885 480 SUPERFAMILY NAC domain 33 197 IPR036093 GO:0003677|GO:0006355
Mal1g1885 480 Pfam No apical meristem (NAM) protein 42 167 IPR003441 GO:0003677|GO:0006355
Mal1g1885 480 Gene3D NAC domain 49 199 IPR036093 GO:0003677|GO:0006355
Mal1g1885 480 MobiDBLite consensus disorder prediction 336 357 - -
Mal1g1885 480 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78-LIKE 32 476 - -
Mal1g1885 480 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1885 Mal-Chr1 24508342 24514293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1885 26 474 NAC Transcription Factor Family AT3G10480 43.284 1.69e-113 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g1885 NAM 3.8e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1885 1 24508342 24514293 Mal1g1885 1 24508342 24514293 ECH