Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1878 ATGAGGCAAAGCCATTCTCTAGATCTTGGGAGAAAGAATTCTGCTACAATTTCTTCTAGAAACTCAGATATTGATCATGCTCTAAGTCAGGCCTCTAGTTGCAGAAGCATTTCAGATACTGAATCTTGCATTTATGATCAAAATTATGCCAAGTATGTGCCCCTAGTTACTAAACTTCCATCACCAAATAGGCATGAAAACTTTAGCCTTGAGCTGGAAAGGTTGAGAATTGAACCAAGACATGCTAGGAATGCATGCAGAAGCTCAAACCGAAACATTGATGCATCACAAAAGTTGAATGAACTAAAGATTGATGCATCAACTCTTTCCTTTCTTCACAGCTTAAAGCCACAACCTATCATCCAACGCGACTTGAAACCTGCAAACATCTTACTTGGTGGTAATCTTGTCAGCAAGATTGTTGATATTGGTCTGTATAAGGACCAAGGTAGCCAGGATCGCGTCCCAGCTCGTTCGAGTTTCTGGTGCAGGAACGTAAAGAAAAGGCGAGCTGGGTTTGGCAAACGCGGGTTAGGGCTTTAA 543 0.418 MRQSHSLDLGRKNSATISSRNSDIDHALSQASSCRSISDTESCIYDQNYAKYVPLVTKLPSPNRHENFSLELERLRIEPRHARNACRSSNRNIDASQKLNELKIDASTLSFLHSLKPQPIIQRDLKPANILLGGNLVSKIVDIGLYKDQGSQDRVPARSSFWCRNVKKRRAGFGKRGLGL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1878 180 SUPERFAMILY Protein kinase-like (PK-like) 107 153 IPR011009 -
Mal1g1878 180 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 106 145 - -
Mal1g1878 180 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 13 103 - -
Mal1g1878 180 PANTHER OS02G0152300 PROTEIN 106 145 - -
Mal1g1878 180 PANTHER OS02G0152300 PROTEIN 13 103 - -
Mal1g1878 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1878 180 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g1878 180 Gene3D Transferase(Phosphotransferase) domain 1 79 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1878 Mal-Chr1 24436403 24437662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1878 106 145 Receptor kinase-like Gene Family AT5G12000 67.500 5.15e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal1g1878 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1878 - - gmx:100818628 115.931