Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1873 ATGGGTAAGGTGGACCCCACTAAAATGTGTGAGGGATTTGTCAATGAAGGTGAAACAATAGAAGATGATATGGAAGGCAATATATCACATGGTGTGAGTGGATGTAGCTTTGACGAGGCATTTGGTGTGAATTGCTTGGAAGACATATTGCGTATTAATTTTAAAGAGGTCACTGAACAAGATTTATTGAGATACCATTTTGTGGATGTTGGTGTGGCGTTTACATTTTACAATTGGTATGCTAGTTTTAATGGTTTTGCCGCACGAAAAAGCAAGGTGCTAAGGAAGAAAACAGGGGAATTAACCCAACAGACATTTGTTTGTTATAGACAAGGTATTGTAAAAGAGAAAAGTGGGCCGTCTACTAGCCGAAAGCGTGTGCGAAGACCTCGTGTGAGATGTGGATGCGAAGCAAAGTGTCGTGTTCATATTGAAGCAAACAGTGGCAGGTGGTACATGAAATTTATTGACAACACACATAACCATACGTTGTTGGATGATAAATTTACTCACATGCTACCGGCCCATAGAAAGATGACCGATCACGAAATTTGGCGAATGAGCAACATGAGGCAAGTTGGGATGAAGACAAGCCATATTTTTGGATTGTTTGCTAGTGAAGCTGGTGGTTTTGAAAAAGTTGGTTTTCGAAGGCGAGACATGTATAATGAACAAGTGAGGCAGAGATTAACTTCTTCATCAGACGCCAAAGCTGCATGTGAGTATCTTGAAACCATGAGGATTAGTGATGAAACTATGTTTTGGAGGCATAAGGTGGATGATAAAGGTAGACTTTCCCATCTGTTTTGGTGCGATGGTGTTGCTCAAAGGGATTACTCGATATTTGGAGATGTAGTTGCTTTTGATGCTACATACAAGAGAAATAAGTACATGTGTCCATTAGTCGTGTTTTCTGGGGTAAACCATCACAACCAGAGTATTGTCTTTTGTGGTGCCATTGTTTGCAATGAAACAGAAGAAACATATGTTTGGTTGTTGGAACAATTTTTGGCTGCAATGGGTGGGAAAAGTCCAACTTCCGTAATAACTGACGGTGATTTAGCAATGAAAAATGCAATTAGAAGAGTTTTTCCAAAATGTCACCATCGATTGTGTGCTTGGCATCTGATACGTAATGCTTGTTCCAATGTTGGGAACACACGATTTGTGAGGAAATTCAAACAGTGTATGTTAGGTGACTATGATGTTTGTGAGTTTAAGCGAAAATGGGAAAAAATGGTTAATGAGTTTGGATTGGAAGGCCACAAATGGGTTAAGGATATGTATGGAAAACGTGATATGTGGGCGACTGCCTACATAAGAGGTAAGTTTTTTGCTGGATTTAGGACAACTTCTCGCTGCGAAGCGTTGCACGCTCAATTTGGAAGGTATGTTAACTATCAAAACAATCTAGTTGAATTTTTGCATCAATTTTTTAGATGCTTAAATTACTTGCGCTATACTGAATTAGAGGCAGACTTTGGCTCCGTTAATGGCAAACCTGTTTTAGAAACACCATTGCCTCTAATTGAGAGAGCTGCAGGAGAATTGTACACTAGAGAGGTTTTTTTCCTAGTTCAACCTGTGATACGCAGAGCATGCGCATGCACCGTTGTTGATGCTAGACAAGTTGAATCATGTTATTTCTATACTGTCAAGAAATACCCAAAAGAACATGTAGAATGGAAAGTGTCATTTTCCCAATCAAGTCTTAAATTCAAGTGCTCGTGTGAGAGGTTAGAGTCCCTAGGCATTTTTTGTGAACATTTGGTTGCTGTTTTGGTGTATTTGGACATTGTCACCTTGCCGGAATGTCTTGTTTTAAAAAGATGGACAAAAATTGCCAAGGATTCAATTGCTTTACCTAGTTCTAAAAAGGATTTGTTAAGGGAGCCAACAATGGTTAGCCAATTTACAAATGTGGTAGAACGTTGTAAACGGATGGCTGTAGCAGCTGTGAAATGTGGGAAGCCACAACTCATGCGTAATACAATAGATCTAATTGACGAACATACAAAGTTATTAGAAGTTGCATGTGTCAATGATGGAACTGGATATGTGTATAATCGGACGTTTTTTGAAGACACAATACTTAATCCAAATCGTGTCAGAACCAAGGGATGTGGTGCAACAACGTCGACTACACAAACCAAGATACAAAATAAGGTGAGGAAAACTCAAACATGTAGTCTATGCAAAATGGAAGGACACAACCGAAAGTCGTGTCCAATTCAGACTCAAACCACACATGATAATGAAACTCAGGCTGATTCCAATGTCGACGAGTATGAAGATTTTGGAGATATAGGAACTGTTGACATGGTGAGCTTTGTTGGATTAACAATTTTAAATTCTATTGATAATTTATAA 2370 0.3899 MGKVDPTKMCEGFVNEGETIEDDMEGNISHGVSGCSFDEAFGVNCLEDILRINFKEVTEQDLLRYHFVDVGVAFTFYNWYASFNGFAARKSKVLRKKTGELTQQTFVCYRQGIVKEKSGPSTSRKRVRRPRVRCGCEAKCRVHIEANSGRWYMKFIDNTHNHTLLDDKFTHMLPAHRKMTDHEIWRMSNMRQVGMKTSHIFGLFASEAGGFEKVGFRRRDMYNEQVRQRLTSSSDAKAACEYLETMRISDETMFWRHKVDDKGRLSHLFWCDGVAQRDYSIFGDVVAFDATYKRNKYMCPLVVFSGVNHHNQSIVFCGAIVCNETEETYVWLLEQFLAAMGGKSPTSVITDGDLAMKNAIRRVFPKCHHRLCAWHLIRNACSNVGNTRFVRKFKQCMLGDYDVCEFKRKWEKMVNEFGLEGHKWVKDMYGKRDMWATAYIRGKFFAGFRTTSRCEALHAQFGRYVNYQNNLVEFLHQFFRCLNYLRYTELEADFGSVNGKPVLETPLPLIERAAGELYTREVFFLVQPVIRRACACTVVDARQVESCYFYTVKKYPKEHVEWKVSFSQSSLKFKCSCERLESLGIFCEHLVAVLVYLDIVTLPECLVLKRWTKIAKDSIALPSSKKDLLREPTMVSQFTNVVERCKRMAVAAVKCGKPQLMRNTIDLIDEHTKLLEVACVNDGTGYVYNRTFFEDTILNPNRVRTKGCGATTSTTQTKIQNKVRKTQTCSLCKMEGHNRKSCPIQTQTTHDNETQADSNVDEYEDFGDIGTVDMVSFVGLTILNSIDNL* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1873 789 Pfam MULE transposase domain 285 379 IPR018289 -
Mal1g1873 789 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Mal1g1873 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 628 IPR031052 GO:0006355
Mal1g1873 789 ProSiteProfiles Zinc finger SWIM-type profile. 560 598 IPR007527 GO:0008270
Mal1g1873 789 Pfam SWIM zinc finger 574 596 IPR007527 GO:0008270
Mal1g1873 789 PANTHER OS02G0262500 PROTEIN 61 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1873 Mal-Chr1 24373741 24377216 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1873 MULE 1.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1873 - - aip:110272016 633.639