Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1867 ATGTTTTCTAGGTTGATACGTCCTCATGAACATGAAGGAAGTGTTGTTGTTGTTCAGGAAGATCATCTTCACACTCACCTTGCTTCTGACCCTTGTCTTGTTCTCACTTCTGATCCAAAACCTCGTCTTCGTTGGACTACTGACCTTCACCAACGTTTTGTTGATGCTGTCACTCAACTTGGTGGTCCAACAAAAGCGACACCAAAAGCGATCATGAGGACCATGAATGTCAAGGGTTTGACACTCTATCATTTAAAAAGTCATCTTCAGAAGTATAGGCTTGGTAAGCAAGCTGGAAAAGATTTTGACGAGGGATGCAAAGATGGTTCATATCTTCTAGAAAGCCCTGGCACTGAAAACTCATCTCCAAAGTTACCAGCTTCTGATGCAAACGAGGGTCATGAAGTTAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGCTACATTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAAGATGCAGAACGGAGATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTGGCTGATCAATTTATCGGTGATACAACTATAGACACAGACATCCAAAAATTTCAAGAATTACCAAGTACTGAGCTAGGTGGAAATGGAATGCATGTTTCAGAAGTACCATATATTCTCCAGCCTCAAGGGGCTAACTGTTCCACTGAAAGTTGCCTAACATCACTTGAGAGTCTCAGAGGATTGACACTAGAAGGATCACCTGGTGGGACAAAGAGGATGATGGGCTTGGACTCCATGGTATCACCTTTGATCTGGAGTGAAACTAACATGAGAACTCAAGGCATTCATTTAGCTCAAGTCAATCCTCAAGGAATAGCAAGGTATGGAATGTAG 876 0.4258 MFSRLIRPHEHEGSVVVVQEDHLHTHLASDPCLVLTSDPKPRLRWTTDLHQRFVDAVTQLGGPTKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDFDEGCKDGSYLLESPGTENSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGDTTIDTDIQKFQELPSTELGGNGMHVSEVPYILQPQGANCSTESCLTSLESLRGLTLEGSPGGTKRMMGLDSMVSPLIWSETNMRTQGIHLAQVNPQGIARYGM* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1867 291 MobiDBLite consensus disorder prediction 110 132 - -
Mal1g1867 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Mal1g1867 291 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 291 - -
Mal1g1867 291 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Mal1g1867 291 Gene3D - 39 97 - -
Mal1g1867 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Mal1g1867 291 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Mal1g1867 291 SUPERFAMILY Homeodomain-like 40 95 IPR009057 -
Mal1g1867 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 291 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1867 Mal-Chr1 24334315 24337683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1867 25 236 G2-like Transcription Factor Family AT3G24120 48.536 1.37e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal1g1867 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1867 - - gmx:100779871 444.121