Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1857 ATGGAGTATCACTTGTTGTTGCTTCTTTGCTTTTCTACATTGTTATATGTTACTTCTGCATTGAACTTTGAGGGTTTGGCTCTTTTGTCACTCTTGAAGCACATGACTATTGTTCCTGCTAACATAAACTCCACATGGAATTCCTCTGATTCCACTCCATGTTCATGGGAAGGAGTTCAATGTGATCATGCCTTAAATGTAACATCTTTAAACCTAAGTGATTATTCAATTTTTGGTCAATTAGGACCTGAAATTGGAAATTTGATTCACCTTCAAACCCTAGACTTGTCATTTAATGATCTCTCAGGAGAAATTCCACCAGAGTTAAGAAATTGTAGTATGCTTGAGTACTTGGATCTTTCTGCAAACAACTTTAGTGGTGAAATTCCTCAATCCTTGTTTCAAATTAATTCTTTGGAATTTTTGTATCTCAACAACAATAGTTTAAGTGGTTCAATTCCTTCTAGTATTGGAAAACTTAGTAACCTTGACTCAATAAATCTTGAAAGTAATCAGTTGTCAGGAACAATTCCCAAATCCATAGGAAATTGTAGTAAATTGAGTTTCCTAGTTTTCGACTCGAATGAATTGGAGGGAGTTCTTCCTGAGAGTCTAAACAATCTAAAAGATCTTTATTATTTAAGTTTCAATCTTAATAATCTTGGAGGTACCATTCAGTTAGGGTTGAGAAATTGCAAAAAGTTAAATTATTTGGGTCTTTCATTCAATAATTTTAATGGTGGTATTCCGTCAAGTTTAGGTAATTGCAGTGGTCTAATAGAGTTCTATGCTGCAATGAATAATTTAGATGGAACCATACCATCAACCTTTGGTTTGCTTCACAATCTTACTATGCTAATAATTCCAGAGAATCTTTTGTCTGGGAATATACCTCCACAGATTGGTAATTGCAAGTCATTGGAAATGTTACATCTATATAACAATACACTTGAGGGAGAAATTCCTAGTGAATTGGGGAAATTGAGTAAATTACGCGATCTTAGATTGTATGAAAACTTTCTGGTAGGGGAAATTCCACTTAGCATATGGAAACTTAGAAGCCTTGAACATGTTCTTGTGTATAGTAATAGTCTCATGGGGCAGTTACCTTTGGAGATGACTGAGCTCAAAAATCTCAAGAACATTTCATTGTTTAGAAACCAATTTTCTGGAGTTATACCTCAAACCTTAGGAATTAATAGCAGTTTGGTGCAGTTGGATTTTATGTTTAACATGTTCAATAGTACACTTCCACCAAATCTTTGTTTTGGAAAGAAATTAGTGAAGCTGAATATGGGTGGCAATCAATTTATTGGAAGGATACCTTCTGATGTAGGAAGGTGTACAACTCTCACAAGGGTGAGACTCGAAGATAATTATTTTACCGGGCCTCTTCCTGATTTCGAAATGAATCCGAATATCTCGTACATGAGCATCGGCAACAACAATATCAATGGAACAATTCCATCAAGTTTGAGTAACTGCACAAATCTCTCTCTTTTAGATTTGTCCATGAACAGCTTAACGGGTTTCGTGCCCTTAGAGCTTGGAAACCTTGTGAATCTCCAGAGTTTGAAACTTTCTTACAATAACTTGGAAGGGCCTTTGCCACCTCAACTGTCAAAGTGTACTAAAATGAGTAGTTTTGATGTGGGATTCAATTTCCTTAATGGTTCGTTTCCATCAAGTTTTCAGAGCTGGACAACCTTAACCAAGTTGATTCTCAGAGAGAATCATTTTAGTGGAGGAATCCCAGCTTTCTTATCAGAATTTGAAATGCTGAATGAGTTAAAACTTGGTGGAAATGATTTTGGAGGAAATATTCCTAAATCAATTGGAGAATTACAAAATTTGTTGTATGATTTAAATCTAAGTGCTAATGGACTGGTAGGTGAGCTTCCTACGGAGATTGGAAACCTAAAGAGTCTGCTAAAACTGGATCTATCTTGGAACAATTTGACAGGAAGCATACAAGTTCTCGACAAGCTCAGTTCATTATCCGAATTGAATATTTCATACAATTCTTTTGAAGGTTCTGTATCACCACAACTGACGAATTTAACAAATTCTTCATCATTTTTGGGCAATCCTGGCCTGTGTGTTAGCCTTTCGTTATCCAACGGCTTCAATTTCACAAGAGACAGCAATTTAAGGCTATGTAATCAAGATGCCGCAAAATCAAAAAGTCACAGTAAAGTTGCAATTGTGATGATAGCACTTGGATCCTCAATACTTGTTGTGCTCTTGCTAGGACTAACTTATATATTTCTAGTCAGAAAGTCTAAGCTGGAAACCACCGTCGCCGAGGAAAACGATTCTTCAGATCTGCTCAAGAAAGTGATGGAAGCTACAGAGAATCTAAATGATGAGTATATTATAGGAAGAGGAGCTGAAGGAGTTGTTTACAAAGCTGCAATAGATCCAGACAAAATTTTGGCAGTGAAGAAGCTTGTATTTGGCGAGAACGAACGAAAACGCGTACACATGTTAAGAGAAGTTGAAACACTTTCAAAGATTAGACATAGAAATTTGGTGAGACTTGACGGTGTTTGGTTGAGAGAAAATTATGGTCTAATCTCATACAAATACATGCCAAATGGAAGCCTTTATGAAGTTTTGCATGAGAAGAATCCGCCGCAATCCATAAAATGGAACGTCAGGAATAAGATAGCTGTTGGAATTGCTCAAGGATTGGCTTATCTTCATTATGACTGTGATCCTGTCATAGTACATAGAGACATCAAAACAAGCAACATACTTTTAGATTCTGAAATGGAGCCTCATGTTGCTGATTTTGGTCTTTCTAAGATTTTGGATCAGTCTTCTAGTTCTTCCTCAACACAGTCAATAAATGTTTCTGGTACACTTGGTTACATTGCACCAGAGAATGCTTATACAACAGTAATGGGAAAGGAGTCTGATGTATACAGTTATGGGGTGGTTTTGCTTGAGTTGATATCTAGAAAGAAGGCAATAGACCCATCATTTATGGAAGGAGTGGATATAGTTACTTGGGTGAGATCTTTGTGGGAGGAAACAGGAGTTATTGATGAAATTGTTGATTCAGAACTTGCCATTGAAATTTCAAATTATAATTCTACTGATGTGATGAAAGAAGTGACCAAGGTGTTTTTGGTTGCTTTGAGATGTACAGAAAGGGATCCACGTAGGAGACCTACAATGAGAGATGTTGTCAAACATTTGTTGTAG 3210 0.3642 MEYHLLLLLCFSTLLYVTSALNFEGLALLSLLKHMTIVPANINSTWNSSDSTPCSWEGVQCDHALNVTSLNLSDYSIFGQLGPEIGNLIHLQTLDLSFNDLSGEIPPELRNCSMLEYLDLSANNFSGEIPQSLFQINSLEFLYLNNNSLSGSIPSSIGKLSNLDSINLESNQLSGTIPKSIGNCSKLSFLVFDSNELEGVLPESLNNLKDLYYLSFNLNNLGGTIQLGLRNCKKLNYLGLSFNNFNGGIPSSLGNCSGLIEFYAAMNNLDGTIPSTFGLLHNLTMLIIPENLLSGNIPPQIGNCKSLEMLHLYNNTLEGEIPSELGKLSKLRDLRLYENFLVGEIPLSIWKLRSLEHVLVYSNSLMGQLPLEMTELKNLKNISLFRNQFSGVIPQTLGINSSLVQLDFMFNMFNSTLPPNLCFGKKLVKLNMGGNQFIGRIPSDVGRCTTLTRVRLEDNYFTGPLPDFEMNPNISYMSIGNNNINGTIPSSLSNCTNLSLLDLSMNSLTGFVPLELGNLVNLQSLKLSYNNLEGPLPPQLSKCTKMSSFDVGFNFLNGSFPSSFQSWTTLTKLILRENHFSGGIPAFLSEFEMLNELKLGGNDFGGNIPKSIGELQNLLYDLNLSANGLVGELPTEIGNLKSLLKLDLSWNNLTGSIQVLDKLSSLSELNISYNSFEGSVSPQLTNLTNSSSFLGNPGLCVSLSLSNGFNFTRDSNLRLCNQDAAKSKSHSKVAIVMIALGSSILVVLLLGLTYIFLVRKSKLETTVAEENDSSDLLKKVMEATENLNDEYIIGRGAEGVVYKAAIDPDKILAVKKLVFGENERKRVHMLREVETLSKIRHRNLVRLDGVWLRENYGLISYKYMPNGSLYEVLHEKNPPQSIKWNVRNKIAVGIAQGLAYLHYDCDPVIVHRDIKTSNILLDSEMEPHVADFGLSKILDQSSSSSSTQSINVSGTLGYIAPENAYTTVMGKESDVYSYGVVLLELISRKKAIDPSFMEGVDIVTWVRSLWEETGVIDEIVDSELAIEISNYNSTDVMKEVTKVFLVALRCTERDPRRRPTMRDVVKHLL* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1857 1069 SUPERFAMILY L domain-like 470 693 - -
Mal1g1857 1069 SMART LRR_typ_2 519 543 IPR003591 -
Mal1g1857 1069 SMART LRR_typ_2 663 687 IPR003591 -
Mal1g1857 1069 SMART LRR_typ_2 88 112 IPR003591 -
Mal1g1857 1069 SMART LRR_typ_2 328 352 IPR003591 -
Mal1g1857 1069 SMART LRR_typ_2 640 662 IPR003591 -
Mal1g1857 1069 SMART LRR_typ_2 160 184 IPR003591 -
Mal1g1857 1069 SMART serkin_6 787 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1857 1069 Gene3D Transferase(Phosphotransferase) domain 1 864 1069 - -
Mal1g1857 1069 SUPERFAMILY RNI-like 194 509 - -
Mal1g1857 1069 Pfam Leucine rich repeat 472 532 IPR001611 GO:0005515
Mal1g1857 1069 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Mal1g1857 1069 ProSiteProfiles Protein kinase domain profile. 787 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1857 1069 Pfam Protein kinase domain 790 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1857 1069 Gene3D Ribonuclease Inhibitor 171 277 IPR032675 -
Mal1g1857 1069 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 127 1067 - -
Mal1g1857 1069 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 3 164 - -
Mal1g1857 1069 Gene3D Ribonuclease Inhibitor 352 707 IPR032675 -
Mal1g1857 1069 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 127 1067 - -
Mal1g1857 1069 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 164 - -
Mal1g1857 1069 SUPERFAMILY Protein kinase-like (PK-like) 777 1068 IPR011009 -
Mal1g1857 1069 ProSitePatterns Serine/Threonine protein kinases active-site signature. 909 921 IPR008271 GO:0004672|GO:0006468
Mal1g1857 1069 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Mal1g1857 1069 Gene3D Ribonuclease Inhibitor 278 351 IPR032675 -
Mal1g1857 1069 Gene3D Ribonuclease Inhibitor 21 170 IPR032675 -
Mal1g1857 1069 SUPERFAMILY L domain-like 26 295 - -
Mal1g1857 1069 Gene3D Phosphorylase Kinase; domain 1 755 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1857 Mal-Chr1 24262409 24265731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1857 18 1068 Receptor kinase-like Gene Family AT1G17750 50.000 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g1857 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1857 - - gmx:100817655 1504.19