Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1835 ATGGAAGATACATTTCCCAAGATGGAAATCTTTACACAAAAGGAATTACCAACTTGTTTGCAAGAAATAGGAACAACAGAATCCAAGTATTTGGAGGATACAATTATAAGAAGAGGCTCTTACTCTCTCACTTCATCAACAGAATCACCACAGAAACTTTTCTGGTGTACTTCAAATTCTACTTCAATGAAACAAGAGGTACCTTTAACCACTTTAGTTAATCAAATGCCTGCAAAGTTCAATGATCATCATGATGACATGAAGAATATGAAAACTATAAACCAACCCATTTCTGAATTCAATTCTATCACCAATCCTAATGTCTTAGCCTCAGATATAAAACATAGTTTTGTTCCTCTAAATCTTTTGGAAACTCTCCCGGCTTTAACCGTAACTCCGGTGTCTGATGAGCCTACAGTTTCTTTAGCTTCTTCTTCTACTATACCGAAATATCCAAATTTGACTTTGTTTTTGCAGGAACCATCCATGCTATACTCATCATCCTCACTTATCCAAAGTAGTGAAATCATGTCAACAACTTCAAATCCCACATATCCTATGTCTCAATTTGGCCTAACTCAGCATCATCAACAAAGTGGTTATGAATTTTATGATTCTAACAAAATGAATAAGAATATGATGACAAATATGCAATCCAAGTCTTTCAATGAGAATTGGTTGAGTACCACAAAGACTCAACCTTTGAAGTATGGTGCAAGAGGGAAGCTTTTCAAAGGGGTAAGGCAGAGACATTGGGGAAAATGGGTAGCTGAAATTAGGCTACCAAGAAACAGGACTAGGGTCTGGTTAGGGACATTTGAAACAGCTGAAGATGCTGCAATTGCATATGATACAGCAGCATATATACTAAGAGGAGAATGTGCTCAGTTAAATTTTCCAAATTTAAAGCATGTGATTCAAGCCAATTCATTGAATGGAACAACAGCTTCACTTGTTGAGGCAAAACTGCAAGCAATATCACAAGGTGTTTCTTCTTCTCATAGAAAGCAAGGTGATTCATCCGCAAGGTTAAACAATAAGCACATTGATGAGATTAAAAATGGAAAGGATGAAAGTATAAATGAGTTGAAGGTTGGAGGTGACATAACTGAGAGAAGCAAAAGTACACAGAATGAGATATGTGATGTGGAAACTGTTCAGTTAAGCAGAATGCCATCTTTAGATATGGATATCATTTGGAATGAACTTCTAGTTTCTGATTCATGA 1227 0.3619 MEDTFPKMEIFTQKELPTCLQEIGTTESKYLEDTIIRRGSYSLTSSTESPQKLFWCTSNSTSMKQEVPLTTLVNQMPAKFNDHHDDMKNMKTINQPISEFNSITNPNVLASDIKHSFVPLNLLETLPALTVTPVSDEPTVSLASSSTIPKYPNLTLFLQEPSMLYSSSSLIQSSEIMSTTSNPTYPMSQFGLTQHHQQSGYEFYDSNKMNKNMMTNMQSKSFNENWLSTTKTQPLKYGARGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEDAAIAYDTAAYILRGECAQLNFPNLKHVIQANSLNGTTASLVEAKLQAISQGVSSSHRKQGDSSARLNNKHIDEIKNGKDESINELKVGGDITERSKSTQNEICDVETVQLSRMPSLDMDIIWNELLVSDS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1835 408 ProSiteProfiles AP2/ERF domain profile. 243 300 IPR001471 GO:0003700|GO:0006355
Mal1g1835 408 CDD AP2 242 302 IPR001471 GO:0003700|GO:0006355
Mal1g1835 408 Pfam AP2 domain 244 292 IPR001471 GO:0003700|GO:0006355
Mal1g1835 408 SMART rav1_2 243 306 IPR001471 GO:0003700|GO:0006355
Mal1g1835 408 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 407 - -
Mal1g1835 408 PRINTS Ethylene responsive element binding protein signature 266 282 IPR001471 GO:0003700|GO:0006355
Mal1g1835 408 PRINTS Ethylene responsive element binding protein signature 244 255 IPR001471 GO:0003700|GO:0006355
Mal1g1835 408 SUPERFAMILY DNA-binding domain 243 300 IPR016177 GO:0003677
Mal1g1835 408 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 9 407 - -
Mal1g1835 408 Gene3D AP2/ERF domain 243 301 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1835 Mal-Chr1 24079741 24080967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1835 1 403 AP2-EREBP Transcription Factor Family AT4G13620 38.242 2.01e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g1835 AP2 1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1835 - - cam:101510582 491.115