Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1832 ATGAGTACAGAAAAGGAGATGGTGCGAGGCCACAACACTGAGAAAAGTGAAGAGCTTGACCTAAAAAACAAAAACAAAAACAAGCTCAAGATCCCTGACAACCCCAACATATTATATCCCTGCATGCTTGAGATACCCACTGGAGCAGATGTGGCAAAAAATATCTTTGATTACGTCCATCATCAAGGGAAGGGGGTATGCATCATAAGTGGAATTGGAGTGGTGGCACAAGTCACACTTCGTTATCCCACAGGGGAAATTGCAACTCATCAGGGAAAATTCCAAATTATTTCGATATCTGGAACGATTTTCCCATCGCCGACACCAACGAATGTAGAGGGATTGGCAATTCATTTGTGTGACACTAAAGGACATATGGTTGGGGGGAATGTGATACCCCCTCTGGTGGCTTCGAGTCCAGTGGTGTTGACGATTGCTTCATTTGCAGCAAACCCTGTAATTGAAAAGCTGTCTTCGGTGGCCTATGACCAAGGTGAAGATGAAAATAATTATGTTGATGCAGATGGTCACCTAGCAGAAGGTGATGGTGACTTGTTAAGTGTTGGAGGAGGATCAACAGCTGAAATGAGGAATGTGGTGACCAACCATCCCTCATCCTCTACTTAA 627 0.4418 MSTEKEMVRGHNTEKSEELDLKNKNKNKLKIPDNPNILYPCMLEIPTGADVAKNIFDYVHHQGKGVCIISGIGVVAQVTLRYPTGEIATHQGKFQIISISGTIFPSPTPTNVEGLAIHLCDTKGHMVGGNVIPPLVASSPVVLTIASFAANPVIEKLSSVAYDQGEDENNYVDADGHLAEGDGDLLSVGGGSTAEMRNVVTNHPSSST* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1832 208 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 165 IPR014476 GO:0003680
Mal1g1832 208 SUPERFAMILY AF0104/ALDC/Ptd012-like 38 150 - -
Mal1g1832 208 CDD DUF296 43 148 IPR005175 -
Mal1g1832 208 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g1832 208 ProSiteProfiles PPC domain profile profile. 35 170 IPR005175 -
Mal1g1832 208 Pfam Plants and Prokaryotes Conserved (PCC) domain 40 149 IPR005175 -
Mal1g1832 208 Gene3D - 41 165 - -
Mal1g1832 208 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 23 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1832 Mal-Chr1 24050091 24050717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1832 25 157 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 41.611 3.11e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1832 - - pvy:116128567 128.642