Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1824 ATGAGTAATGAGGACCCTGGAATTTCAGGCTATCAATATAAAGGTACAATAAGTGCTGTATTTAGTGACAAAACCCTTTCTGATAAAGATGATGATGAAGATAATATATGTCTACAAACTGGTGAAGAATTTTCTACTGAGTTCTTACGTGATCGGGTTGCTTTAAGGAGATTTTCTGTTACAACTGACGAAGAGCAGCGTCTCCCAAACATATTGGATTTCAATATAACTAACAATAACAATTACCAGCCGGTTTACGAGGATCAAAATCATGTTCTTGGGCTAGGGAGAATGAATTCTGATAGCAATTTAGATTTGTCAGAGATTGCTTTAGCTAGAGGCTATGTTTCTGAAGTCGACAACATGGCTTATCCTAATAATTTGAGTAGATACCATTGTGATTATGGTGGTATGAGACAAGCATCAGGTGCATTTTCAAGACAATTATCTAGTAGGTTTTCTGACGGATGCGATCAAGTTGTCTCGATACCAAATACTCCGTCTATTTATGATGTTGAGTCTCCTCGTCCGTGCCATCCTTATGGAACAGTATTCTCAGAAGGTTCTTTCTACAAGAAGATAAAGTTTCTATGTAGTTTTGGAGGTCGAATATTGCTAAGACCAAATGATGGGAAACTTAGATATGTGGGTGGAGAGACCCGGATTATATCGATCAGGAAGAACATGACACATGAGGAACTTACGAGGAAGACTTCTGGTATTTGCAATCAAACACACATTATCAAATACCAGCTCCCTGGAGAGGATCTTGACGCTCTTATTTCTGTTTGTTCTGACGAGGATCTTCATCACATGATTGAGGAGTATGAAGAGCTTGAAAGAGCTGGAGGATCTCAACGACTTAGGATTTTTCTCATTCCTTCAAATGAATCTGAGAGTCCAAGTTCTAATGAATCAAGATTCAATCAACAAAGTGACGCCGATTATCACTATGTTGTTGCTGTTAATGGTATTCTAGATCCAAGTCCGCGAAATAATCAAAGCGGGATGAGTTTGGCAAGTCACGCAAGCCATTTTGCATATACCTCTGATTACAATAGTCCACATTTGCATAGGGAATCCTCCACATCTACATTTTCTTCAGAGGTAAAGGATTGCAGCCCAACCTCTTCAAATTTGGCAAGCATAATGTCAAAACGAGGTCCATTTTTAACAGCACTGAACGTACCCGTCAAGTCATTTAATCAAACGTCTCCATCTCCCATCCGTGTACTGCCTAAAGATCCAAAAATATCTAATGTTCAACTATTTACGGATCAACCGTATAATGTTGTTAATGAAAACATTATTCCCTTTGTCACGGAAAAAGTCCCATGTGACAACTCTTTGTATGTAGACAATACAAATTATGTTGATCCGATTGCATATTATAACAATACTCCCCAAGGGCCTCCATGTGTGAACTACCATCCTAGTAATCAATATACATTGAAGTCTGACCAAGTCAAGAAGTCTAATGCTGAATTTCATTTTCACAAACGAACCAATAGTAACGAATTTGTCTCTTCTGCAATTTGTAATCAAACTGGTATGATATTTGAGAGACCTTTAGTCAACAATGAAGGTTCATACCATTTTAACAAGATTGCCTCCCATTCTCATGAGTCACCTAGTGTATTCTTTGTGTCTGGTGATAAGGATGTACCTCAGTACAAAATGTTGCATGCACTTTCCGACTCAACACTTTTGGAGAATAGTGAGAACTACAAAGGTCACTTGCAATTTCCGCTTAATGTTGAGAGAGACAAAATGTCATCACTAGAAACTTCAAGTTCTTTAGGAGAATGTTCGGTACATCCTGGAGAGATTAGTGATGGGAAAGAGCACGTGGTTTTACATCAAAACTTTCCGACTTTTGGAATGAGCAATAGTTTCAAGAGATTGTCAGAATTTGGTAAAGAGAACATACAGTACGAAGATAAAAGCATCGGTTTGTTTGATGAAAAAGTTAGAGCTATGCCACAACAGTTACAATACATCCACTACCAACATGGTGCTTGCTCATCTTCACCAGATTTACAAAGCAGTGGGTGCAATGCATCTGTTGCACCTTTTATCTCTTCACAATCAACTGGAAGTACGATAGAGCAACCACATGGTATACCATTAGACACAATTGCTTCTGAGTTTTCTATGAGGAGCCAAAATTCATCAGTGCATCACCAATATGATGTGTCTGAGACAGAAGACGACCAACCACCTCCCCCTAGTTCTTTTGAATTACGACCTTCTGAGTTCCCAACCGACACAATATCTATACTGCCTATCTCGTATCCAGATATGGTTTCTTCTTCCCTAAGAGAGGTTGTTGTACCTAACGACAATCATACATACTTCCAGAACCAAAAGGATGAAAACATAGTCATTGACAAAGAATATTATGAATCCATCGATGAATTTTGCATCAATAAGCCAGAATCAACAGCAGTTGTCAAGGAGACAGTTGATTACATTTCTTCAGGTATCCAATCATGCTTACATGCTGTCTCAAATAAAGACGAATATGACGAACATACATCTCCTGAAAAAGCAGGGGTAGTATGTGTTATTCCAGAATCTGAAAGTAAGGTTGCAAAATCTGATAGTGAAAAGTTCAGTAAGCCTATTGGTGATTCAGAAATTGCTGAAACAGAGTCTGAACTTCATGGTTTACAGATTATTGAGAATGGTGATCTCGAAGAACTACATGAGTTAGGATCTGGAACCTTTGGAACTGTTTATCATGGAAAATGGAGGGGGACAGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCGCTGGTAGATTTTCAGAGCAAGAGCGGTTGACTAAAGATTTTTTGAGAGAGGCAAAAATTCTCTCAACTCTTCACCATCCAAATGTGGTGGCATTTTACGGGGTAGTTCCAGATGGCCCAGATGGAACATTGGCAACTGTAACAGAATACATGGTACATGGATCATTAAGGAATGTTCTCTTGAAGAAGGAAAGAGTGCTTGACCGTCGTAAAAGGATCATGATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAACTTGGGCGATCATGAACGGCCTGTATGTAAGGTTGGAGATTTTGGTCTATCAAGAATTAAACGCAACACACTTGTTTCGGGTGGTGTCAGAGGGACCCTTCCATGGATGGCACCAGAATTACTAGATGGTAATAGTTCCAGAGTATCTGAGAAGGTCGATATTTTCTCATTTGGCATCACAATGTGGGAAATCTTGACTGGGGAAGAACCTTATGCTAACATGCACTGTGGTGCCATCATAGGAGGTATTGTCAATAATACGCTCAGGCCATCTATTCCGAAACGCTGTGATTCTGAGTGGAAAAAGTTGATGGAAGAGTGTTGGTGCCCTGATCCTCAAGCCAGACCATCCTTCACAGAAGTTAAAAATAGACTCCGCAACATGTCAGCTGCACTGCAGAAAAAGAGACATAATATTGTCAATCGGTGA 3540 0.391 MSNEDPGISGYQYKGTISAVFSDKTLSDKDDDEDNICLQTGEEFSTEFLRDRVALRRFSVTTDEEQRLPNILDFNITNNNNYQPVYEDQNHVLGLGRMNSDSNLDLSEIALARGYVSEVDNMAYPNNLSRYHCDYGGMRQASGAFSRQLSSRFSDGCDQVVSIPNTPSIYDVESPRPCHPYGTVFSEGSFYKKIKFLCSFGGRILLRPNDGKLRYVGGETRIISIRKNMTHEELTRKTSGICNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLIPSNESESPSSNESRFNQQSDADYHYVVAVNGILDPSPRNNQSGMSLASHASHFAYTSDYNSPHLHRESSTSTFSSEVKDCSPTSSNLASIMSKRGPFLTALNVPVKSFNQTSPSPIRVLPKDPKISNVQLFTDQPYNVVNENIIPFVTEKVPCDNSLYVDNTNYVDPIAYYNNTPQGPPCVNYHPSNQYTLKSDQVKKSNAEFHFHKRTNSNEFVSSAICNQTGMIFERPLVNNEGSYHFNKIASHSHESPSVFFVSGDKDVPQYKMLHALSDSTLLENSENYKGHLQFPLNVERDKMSSLETSSSLGECSVHPGEISDGKEHVVLHQNFPTFGMSNSFKRLSEFGKENIQYEDKSIGLFDEKVRAMPQQLQYIHYQHGACSSSPDLQSSGCNASVAPFISSQSTGSTIEQPHGIPLDTIASEFSMRSQNSSVHHQYDVSETEDDQPPPPSSFELRPSEFPTDTISILPISYPDMVSSSLREVVVPNDNHTYFQNQKDENIVIDKEYYESIDEFCINKPESTAVVKETVDYISSGIQSCLHAVSNKDEYDEHTSPEKAGVVCVIPESESKVAKSDSEKFSKPIGDSEIAETESELHGLQIIENGDLEELHELGSGTFGTVYHGKWRGTDVAIKRIKSSCFAGRFSEQERLTKDFLREAKILSTLHHPNVVAFYGVVPDGPDGTLATVTEYMVHGSLRNVLLKKERVLDRRKRIMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDHERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSSRVSEKVDIFSFGITMWEILTGEEPYANMHCGAIIGGIVNNTLRPSIPKRCDSEWKKLMEECWCPDPQARPSFTEVKNRLRNMSAALQKKRHNIVNR* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1824 1179 ProSiteProfiles Protein kinase domain profile. 899 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1824 1179 PANTHER SERINE-THREONINE PROTEIN KINASE 88 600 - -
Mal1g1824 1179 PANTHER SERINE-THREONINE PROTEIN KINASE 787 1176 - -
Mal1g1824 1179 PRINTS Tyrosine kinase catalytic domain signature 1133 1155 IPR001245 GO:0004672|GO:0006468
Mal1g1824 1179 PRINTS Tyrosine kinase catalytic domain signature 981 994 IPR001245 GO:0004672|GO:0006468
Mal1g1824 1179 PRINTS Tyrosine kinase catalytic domain signature 1018 1036 IPR001245 GO:0004672|GO:0006468
Mal1g1824 1179 PRINTS Tyrosine kinase catalytic domain signature 1089 1111 IPR001245 GO:0004672|GO:0006468
Mal1g1824 1179 Pfam Protein tyrosine and serine/threonine kinase 901 1162 IPR001245 GO:0004672|GO:0006468
Mal1g1824 1179 Gene3D - 212 295 - -
Mal1g1824 1179 SMART serkin_6 899 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1824 1179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1024 1036 IPR008271 GO:0004672|GO:0006468
Mal1g1824 1179 Gene3D Phosphorylase Kinase; domain 1 892 986 - -
Mal1g1824 1179 ProSitePatterns Protein kinases ATP-binding region signature. 905 926 IPR017441 GO:0005524
Mal1g1824 1179 CDD PB1_UP2 197 293 - -
Mal1g1824 1179 MobiDBLite consensus disorder prediction 724 752 - -
Mal1g1824 1179 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 88 600 - -
Mal1g1824 1179 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 787 1176 - -
Mal1g1824 1179 SMART PB1_new 208 295 IPR000270 GO:0005515
Mal1g1824 1179 Pfam PB1 domain 209 293 IPR000270 GO:0005515
Mal1g1824 1179 CDD STKc_MAP3K-like 905 1162 - -
Mal1g1824 1179 SUPERFAMILY CAD & PB1 domains 209 303 - -
Mal1g1824 1179 Gene3D Transferase(Phosphotransferase) domain 1 987 1179 - -
Mal1g1824 1179 SUPERFAMILY Protein kinase-like (PK-like) 892 1162 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1824 Mal-Chr1 23900773 23906662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1824 193 345 MAP Kinase Kinase Kinase AT1G16270 50.980 6.24e-37 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Mal1g1824 PK_Tyr_Ser-Thr 4.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1824 - - gmx:100810711 1626.68