Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1817 ATGGATACATTTTTTGCGCTTGGCATCTCTTACTGTTTGGGTGCTGCTGCTATTAACTATTCCAACAGAGACAATGTCAGGCATGTGGAAGTTCTTGAATCCATTCCCCGGTTCAATAAGCTGAAGGACTTAGAACAACTGCTGGATGTTGACAGGTCACCATTGGTTGTTGCAATTTCTGGCAAAGTTGTTTCCGAAACCCCAATTGATTGCGAGATAACTGGTTTAAGAGGTGTAATAGTTGAAGAAAAAGAAGAGGAACATTATCTTCGACGGGATGTTAATCTTCAAAATTGCAAGGATTCTACTAGGGAAAAACAGATATGCAATATAGATGTTTCCTGGACACGACATTCTTCGTTATTATCATCCAAATGTAAAGAGGTTCCTTGGTATCTGGATGATGAGACGGGTCGTGTGCTTGTGGCTGGAGCTTGTGGTGCCGCTGATTTTGAATTACCTGCTGGAAACTCTAAATTTGAAAAGGCAGAGCGGACATATATACATGAAACATCTAATAATATCCAACTTAAAAAGATCCTTGGAATCAAGAGGATTGAACGGGTACTTCCGGTTAGAACTTCCTTGACTATTGTTGGTAAGGTCTATAAATATGCTGACGGGACCATTCAAATTCAGCGACCTTACAACGGGCCATTTTATGTCTCTGGCAAACCGATTGATGAACACATTGCAGAATTTGCCAATGATGCTAGGTGGTGGGAGAATGCTTCTTTGAGCCTGATAGTGTTTGGAGCTTGTCAAATAGCCGCCCGCATCTACTATTTGTTACATCGTGGAAGATGA 807 0.4126 MDTFFALGISYCLGAAAINYSNRDNVRHVEVLESIPRFNKLKDLEQLLDVDRSPLVVAISGKVVSETPIDCEITGLRGVIVEEKEEEHYLRRDVNLQNCKDSTREKQICNIDVSWTRHSSLLSSKCKEVPWYLDDETGRVLVAGACGAADFELPAGNSKFEKAERTYIHETSNNIQLKKILGIKRIERVLPVRTSLTIVGKVYKYADGTIQIQRPYNGPFYVSGKPIDEHIAEFANDARWWENASLSLIVFGACQIAARIYYLLHRGR* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1817 268 Pfam E3 Ubiquitin ligase 112 252 IPR022170 GO:0004842|GO:0006996|GO:0016567
Mal1g1817 268 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 8 264 - -
Mal1g1817 268 PANTHER - 8 264 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1817 Mal-Chr1 23811293 23814048 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1817 8 260 C3H Transcription Factor Family AT1G63900 43.529 5.17e-66 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1817 K15688 - gmx:100800734 235.343