Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1816 ATGAGCTTTTTGTGGAAAGACCTCTTTCCATCATCAACTTGGCCAACTGCTGGATACAGAAAGATTACCTTGGTTGTCACAATTTCTGGCAGAATTGTTTCTGAAACCCCAATTAAGTGCGAGTTGAGTGGTTTAAGAGGTGTCGTAGTTGAAGAAAGAGTAGAGCAACATTATAGTAGAGACTATGATGCAAATAAGCTAACAATGAAATGTAACAATGATAGTTTCCCGCCGCAACATTCTGCTTTAATAATGTCCACTTGTAAAGAGATAACAAATCCTTCAATTTCACGTGTTAGGATGACGTACGGGACTGGTCGCGTGCTTGTGGGATCTCAGGGTGCCACTGATTTTGCATTACCTTCTGGAAGCGAGACATATGAAGATTCGGGTCGGGCACTTCCGTTTGGAACTTCCTTGACTGTTGTTGGTGAGGTAAACTAA 444 0.4189 MSFLWKDLFPSSTWPTAGYRKITLVVTISGRIVSETPIKCELSGLRGVVVEERVEQHYSRDYDANKLTMKCNNDSFPPQHSALIMSTCKEITNPSISRVRMTYGTGRVLVGSQGATDFALPSGSETYEDSGRALPFGTSLTVVGEVN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1816 147 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 21 133 - -
Mal1g1816 147 PANTHER - 21 133 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1816 Mal-Chr1 23802015 23802865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1816 24 138 C3H Transcription Factor Family AT1G63900 46.552 1.81e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1816 K15688 - gmx:100800734 89.3521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1816 1 23802015 23802865 Mal1g1816 1 23802015 23802865 ECH