Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1814 ATGGCGATGGTTCCATGGCGTGGCATCGGTTGTTGTTTGAGTGCTGCTGCTCTTTACCTTCTAGGTAGATCCAGTGGCAGGGATTTTGAAATTCTTAAATCGGTTAACCGGGTTAATCAGCTGAGGGAGCTAGCACAACTGTTGGATGAGGAAATATTTCCCTTGGTTGTTGCAATTTCTGGAAGAGTTGGCTCTGAAAACCCAATTAGCTGCGAGTTCAGTGGTTTAAGAGGTGTTATAGTTGAAGAAATATCAGAGCAACATTTTCTCAAGCACAATGATACTGGTTCCTGGATACAAGATTCTGCGTTGATGTTATCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGAACTGATCGTGTGCGTGTTGTTGGAGCTCGGGGTGCCACTGGTTTTGTATTGCCTGTTGGAAGTGAGGCATTTAAAGAGTCGGATCGGTCACTTGTACGCGGAACATTGGATTATCTCCAAGGTTTAAAGGTGCTTGGAGTTAAGAGAATTGAACGGGTGCTTCCAGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGACGATGTCGGAACCATTCGAATTCAGCGACCTCCCAAAGGGCCATTTTATGTCTCTCCCAAAACAGTTGATGAACTCATTGCAAATCTTGGGAAATGGGCAAGGTGGTATAAGTGTGCTTCTGTGGGCTTGACAGTGTTGGGTGTTTGTATGATAGCCAATCATGCTATTCGGTACATCATGGAAAGACGGCGTCGCAGCGAAATGCAAAAAAGGGTTCTCGCTGCAGCTGCTAAGATATCTGGACAAGATAATGGAGGTGAAATGGATGACAGTTTATCAGATGGTGCTAAAAAGGAACGTGCAATGCCAAATTTGTGTGTAATATGCCTCGAGCAGGAATATAATTCTGTTTTTGTTCCGTGTGGGCATATGTGCTGCTGTACAGCTTGCTCTTTGCACTTGACCAGTTGTCCTCTTTGCCGGAGACAGATAGAGAAGGCGGTAAAGACTTTCCGTCATTGA 1026 0.4483 MAMVPWRGIGCCLSAAALYLLGRSSGRDFEILKSVNRVNQLRELAQLLDEEIFPLVVAISGRVGSENPISCEFSGLRGVIVEEISEQHFLKHNDTGSWIQDSALMLSMSKEVPWYLDDGTDRVRVVGARGATGFVLPVGSEAFKESDRSLVRGTLDYLQGLKVLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPPKGPFYVSPKTVDELIANLGKWARWYKCASVGLTVLGVCMIANHAIRYIMERRRRSEMQKRVLAAAAKISGQDNGGEMDDSLSDGAKKERAMPNLCVICLEQEYNSVFVPCGHMCCCTACSLHLTSCPLCRRQIEKAVKTFRH* 342
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1814 341 Pfam Zinc finger, C3HC4 type (RING finger) 292 334 - -
Mal1g1814 341 ProSiteProfiles Zinc finger RING-type profile. 294 329 IPR001841 -
Mal1g1814 341 CDD RING-HC_LRSAM1 293 332 - -
Mal1g1814 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 340 IPR013083 -
Mal1g1814 341 SUPERFAMILY RING/U-box 293 335 - -
Mal1g1814 341 Pfam E3 Ubiquitin ligase 87 237 IPR022170 GO:0004842|GO:0006996|GO:0016567
Mal1g1814 341 PANTHER - 3 308 IPR044231 GO:0004842|GO:0016567
Mal1g1814 341 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 3 308 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal1g1814 Mal-Chr1 23734125 23737912 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1814 3 266 C3H Transcription Factor Family AT1G63900 73.684 8.98e-143 403