Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1802 ATGACAATGATTATTATGAACATCCTTATCCTCCTCTTCACCACCTTCATAACTACTTCCCACTCCGCCACGTGTCCTCTCAACTTCACCCTCTTAACCACCCTCAGCAGCGGCGGCGCCACCTCAAAACAACCGTCTTCCTTCACCTCAACACCATGCCAGTTTGTCCGGCAAGCCCTCCGCCTTGTCCAATCCGACTACCTCCGTCGCACCGACTCTTTCCTCCCTCCCTCAAACTCCTCCACACCATGCTGGGACTCTTTCCAATCCTACATAAACCAATTCGCACCAACCATCAACATTCGTTCCTTTTGTGGCTTCAAAACTGAATGGATCTCACAAGGTTGCGTCAACGTTACTACAAAACAACAATTTGAAGCAATTGTTCCTAAATCCACTATTCAAAATATGCAATCAAATTGTAACCAATCACTTCAAGATAATTCTCCTTGTGCTCTTTGTACAACTAGTTTATCTGGTTTACCTTCTCTTGGTCAACCCATTGGTAATTTATCTGATTGTACTGCTTATCCTTCAATTTATGCTGCGGCTTTTTCGAATCAATTTGGACCGTCTGATCCTGGTACTGCGAAATGTTTGTTTGCACTTGATTTTAGTTCTGGAGGTTCTTCTGGTAGTAAAAAAAAGGTTATTGCTATTGTTGTTTCAATTGTTTCTGTTTTGGTTGTGTTGTTGATAGTTTTAGGGTTTTGGGCTTATAGGAAATTTAATGATAAGGCAATTGAGGATGGTAAGGATTATGGGGCTAATATCGGTGAGGCGGGTTCGGTTTCTGGGTTGCATTCAATGGATCAAAGTACTACTTTGATTAGGTTTACTATTGATGATATTAAGAAGGCGACGAAGAATTTTCATAGAGATAATATAATTGGGAAAGGGGGTTATGGGAATGTGTATAAAGGGTTGTTGAATGATGGAAGTGAAGTTGCTTTTAAGAGGTTTAAGAATTGTTCTGCTGCTGGTGATACTAGTTTCACTCATGAGGTTGAAGTTATAGCTAGTGTTAGGCATGTGAATCTTGTTGCTTTGAGAGGTTATTGTAGTGCGACGACGCGTTTAGAGGGTTACCAGAGGATTATTGTTTGTGATTTGATGAAAAATGGGAGTCTTCATGATCATTTGTTTGAATCTACTGGGGCGAAACTTAGTTGGCCGGCTCGTCAGAAGATTGCGCTTGGAACTGCTAGGGGATTAGCTTATTTGCATTATGGAGCTCAACCTGCTATCATTCATAGGGATATTAAAGCAAATAATATACTTTTGGATGATAAGTTTGAAGCTAAGGTTGCTGATTTTGGACTTGCAAAGTTTAATCCTGAGGGAATGACTCATATGAGTACTAGGGTTGCTGGAACTATGGGGTATGTTGCTCCTGAGTATGCTTTGTATGGACAATTAACAGAAAGGAGTGATGTGTTTAGTTTTGGTGTTGTGCTTCTTGAGCTATTGAGTGGAAGAAAGGCTCTCCAAACGAACGATGATGGACAGCCTTCTGCTTTGACGGATTGGGCTTGGTCATTGGTTCGAACGGGAAAGGTGTTGGATGTTATTGAAGATGGGATGCCGGAACAAGGTTCAAATCAAGTTCTTGAGAAGTATGTGTTGATTGCTGTGCTTTGTTCTCATCCACAGTTATATGCTAGGCCAACAATGGATCAAGTTGTTAAAATGATGGAGACTGATGATGAATTAGTGCCTTCGATACCTGGACGGCCGATTCCTCTTGTTGCTGGGAGGCTTGATATTGAGAGATCTATTAGCATTACTGGCGGCTCCGGTCAGCTATCTAGTCCGACAGGTTATCAATCGTTCACGTTAGAAATGGGAAGTGAACAAATGGAAAGTGAACGCCACTCTTCTAATCATTCTAGGGAAGAAAGAAGCTCTGCCTCTAGGATTTTGAGTTTGGATTTTGATCAATGA 1944 0.4151 MTMIIMNILILLFTTFITTSHSATCPLNFTLLTTLSSGGATSKQPSSFTSTPCQFVRQALRLVQSDYLRRTDSFLPPSNSSTPCWDSFQSYINQFAPTINIRSFCGFKTEWISQGCVNVTTKQQFEAIVPKSTIQNMQSNCNQSLQDNSPCALCTTSLSGLPSLGQPIGNLSDCTAYPSIYAAAFSNQFGPSDPGTAKCLFALDFSSGGSSGSKKKVIAIVVSIVSVLVVLLIVLGFWAYRKFNDKAIEDGKDYGANIGEAGSVSGLHSMDQSTTLIRFTIDDIKKATKNFHRDNIIGKGGYGNVYKGLLNDGSEVAFKRFKNCSAAGDTSFTHEVEVIASVRHVNLVALRGYCSATTRLEGYQRIIVCDLMKNGSLHDHLFESTGAKLSWPARQKIALGTARGLAYLHYGAQPAIIHRDIKANNILLDDKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQTNDDGQPSALTDWAWSLVRTGKVLDVIEDGMPEQGSNQVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETDDELVPSIPGRPIPLVAGRLDIERSISITGGSGQLSSPTGYQSFTLEMGSEQMESERHSSNHSREERSSASRILSLDFDQ* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1802 647 SUPERFAMILY Protein kinase-like (PK-like) 267 566 IPR011009 -
Mal1g1802 647 ProSiteProfiles Protein kinase domain profile. 291 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1802 647 CDD STKc_IRAK 297 566 - -
Mal1g1802 647 Pfam SPARK 21 161 IPR043891 -
Mal1g1802 647 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 12 622 - -
Mal1g1802 647 MobiDBLite consensus disorder prediction 595 647 - -
Mal1g1802 647 MobiDBLite consensus disorder prediction 595 617 - -
Mal1g1802 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Mal1g1802 647 Pfam Protein kinase domain 291 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1802 647 PANTHER OS01G0253100 PROTEIN 12 622 IPR045271 GO:0004714|GO:0006468
Mal1g1802 647 MobiDBLite consensus disorder prediction 618 639 - -
Mal1g1802 647 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Mal1g1802 647 Gene3D Transferase(Phosphotransferase) domain 1 372 572 - -
Mal1g1802 647 Gene3D Phosphorylase Kinase; domain 1 260 370 - -
Mal1g1802 647 SMART serkin_6 291 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1802 Mal-Chr1 23604819 23606762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1802 6 613 Receptor kinase-like Gene Family AT2G48010 61.702 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mal1g1802 Pkinase 7.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1802 - - gmx:100800760 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1802 1 23604819 23606762 Mal1g1802 1 23604819 23606762 ECH
Mal3g3690 3 114400786 114403202 Mal1g1802 1 23604819 23606762 ECH