Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1801 ATGAAGGAAAAAGTGGATTCACCTATTACTGTTCTTGAGGACTATTTCAGGAGTTCAGATTCAGAAACAAGTTCTTCCAAAGAACCTACTTTGGATTCTGAGTCTCATGATGACATTTCAAAACCTGTTTCAAGGTGGCATTCATTTCTTCAATTGTTGAAAACCAGATCAAAGAAACAGTTACCTGCATTGAATCATCCTCTTGATGGACAACTCTCAAGAAGAATGAGTAGAAGCATGAGGGAGAGCATTCTTCCAAGTTGTCTCACTCTCTCAAATGCAACTTCAACACCTTGTAGATCACCATGGAAAATCTTTTCTCATCATGATATACAAGTTGCAACTAATTATTTTAGCCAAGAAAATTTGATTGGAAAAGGTGGTTATGCTGAAGTTTACAAAGGTTGTTTGCCTAATCATCGATTAGTAGCAATCAAACGGTTAACAAGAGGAACTGCTGATGAAATCATTGGAGACTTTTTATCAGAACTCGGTGTAATGGCGCATGTAAACCATCCCAATACTGCTAAGCTTGTTGGCTATGGAGTGGATGGAGGAATGTACCTAGTTCTTGAATTGTCTGAAAAAGGGAGTCTAGCTTCAGTGCTATATGGTTCCAAGGAGAAAGTACCATGGTGTATTAGGCACAAAATTGCAACAGGAACTGCAAATGGTATATTATATCTTCATGAAGGTTGTCAAAAAAGATTTATCCACAGAGATATAAAAGCTGCAAATATTTTGCTCACAGAGGACTTTGAGCCTCAGATTTGTGATTTTGGGCTAGCAAAATGGTTGCCAGAGAATTGGACTCACCATAATGTTTCAAAATTTGAAGGAACTTTTGGCTACCTTGCTCCAGAGTACTTGCTTCATGGCATAGTAGATGAGAAAACAGATGTATTTGCCTTTGGTGTATTGCTATTGGAATTAGTCAGTGGGAGAAGAGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGTTGAAAAATAATGATATAATGGAGCTTATAGATCCTTCACTAGCAGGTGAATTTGACTTTAGGCAGATGAATCTTATGCTCTTGACAGCTTCTTTATGCATACAACAGTCCTCCATTCGTCGTCCCTCTATGAGACAGATTGTGCAGCTTCTGAATGGAAACCTTAGTTGCTTCAAGGCCATGAAGAAATCTCGATTGCCATTCTTCCGGAAAGTATTTCAGGAAGAGCTCCTTGATTCTGATTAA 1242 0.3833 MKEKVDSPITVLEDYFRSSDSETSSSKEPTLDSESHDDISKPVSRWHSFLQLLKTRSKKQLPALNHPLDGQLSRRMSRSMRESILPSCLTLSNATSTPCRSPWKIFSHHDIQVATNYFSQENLIGKGGYAEVYKGCLPNHRLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKVPWCIRHKIATGTANGILYLHEGCQKRFIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHNVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKNNDIMELIDPSLAGEFDFRQMNLMLLTASLCIQQSSIRRPSMRQIVQLLNGNLSCFKAMKKSRLPFFRKVFQEELLDSD* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1801 413 ProSiteProfiles Protein kinase domain profile. 118 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1801 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Mal1g1801 413 SMART serkin_6 118 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1801 413 Gene3D Phosphorylase Kinase; domain 1 92 192 - -
Mal1g1801 413 SUPERFAMILY Protein kinase-like (PK-like) 95 383 IPR011009 -
Mal1g1801 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Mal1g1801 413 Gene3D Transferase(Phosphotransferase) domain 1 195 398 - -
Mal1g1801 413 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 411 - -
Mal1g1801 413 PANTHER OS08G0249100 PROTEIN 1 411 - -
Mal1g1801 413 MobiDBLite consensus disorder prediction 1 39 - -
Mal1g1801 413 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1801 Mal-Chr1 23591281 23593777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1801 105 379 Trihelix Transcription Factor Family AT1G68690 41.259 7.86e-66 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mal1g1801 Pkinase 4.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1801 - - gmx:100780587 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1801 1 23591281 23593777 Mal1g1392 1 18005711 18008929 ECH
Mal1g1801 1 23591281 23593777 Mal3g4965 3 129691269 129695113 ECH
Mal1g1801 1 23591281 23593777 Mal1g1801 1 23591281 23593777 ECH
Mal4g4268 4 119850936 119854032 Mal1g1801 1 23591281 23593777 ECH