Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1778 ATGAATTCTTTAACATTTGAAGATCATCAACATGAACCCTTGCCTCAAGTCAATAGCATTGATGAACGGGTTCCTTTTGATGGGCAAATATTTGAAACTCAAGAGGATACTTATGAATTTTATTGTTTATTTTCTAAAAGAAATGGATTTTCTATTAGGCGTCATCACATATATAAATCTCGTAAAAACGAGTCTAAAGAGAATCCATCGGATGTTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTGTTGGTAAACCACGCAAAACTGTTGAAGTGGGAAGTCAAAGGAAACGAAAATCTTCAAGATGTGATTGTAGTGCAAAGATGTTGGTTGCTAAGAGAACAATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTCAACAATTCTCACAACCATGAGTTATTGGATGACAAAGAGGTTCAATTTCTTCCCGCTTATCGTAACATTCCAATTGTTGATCAAAGTCGCATACTATTATTGTCCAAAGCTGGTTGCTCCGTAAGTCTTATAATGAGAGTGCTTGAGTTAGAGAAAGAAATAGGCATAGGAAATTTACCATTCTTAGAAAAAGTGCGTAGAGTATAG 591 0.3503 MNSLTFEDHQHEPLPQVNSIDERVPFDGQIFETQEDTYEFYCLFSKRNGFSIRRHHIYKSRKNESKENPSDVYKREFVCHRGGVGKPRKTVEVGSQRKRKSSRCDCSAKMLVAKRTIGFEEKWVVKYFNNSHNHELLDDKEVQFLPAYRNIPIVDQSRILLLSKAGCSVSLIMRVLELEKEIGIGNLPFLEKVRRV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1778 196 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 7 192 - -
Mal1g1778 196 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 192 IPR031052 GO:0006355
Mal1g1778 196 Pfam FAR1 DNA-binding domain 39 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1778 Mal-Chr1 23234287 23234877 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1778 FAR1 4.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1778 - - ccaj:109802755 275.018