Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1721 ATGGCTTTCAAGCACAAATCCATTGCCTATCTACTTTCGATCTTGCTCTTTGTATCATTGCGCGTAGCAAATGGTGTTCCACCAAAAACCATTTGCGAGTCTACCGTAGACCCTACTTATTGTAAAAGCGTACTTGCCAATCAAAATGGAAACATCTATGACTATGGTCGCATTTCAATTAGAAAATCCTTATCGCAATCCCGTAAGTTCATGAATTCAATGGACTCATATCTTCAAGGTGGTTCGTCTTTATCTCAATCCACAATTCGTGCTCTTGAAGATTGTCAATTCCTTGCTGAACTGAGTTTTGAATACTTATCACACACCTATACCACAACAAATCAATCTAGTAATGTTCTTCCAACTTCTCAAGCAGAAGACTTTGAAACTTTTCTTAGTGCCGTTTTGACTAACCAACAAACATGTTTGGATGGTCTAAACACTATAGCTTCGGATCAGAGAGTGAAGAACGACTTGTCGTCATCACTCTCCGATGACATGAAGCTTCATAGTGTCACCCTAGCCTTGTTTAAGAAAGGTTGGGTTCCTAAAAATAAAATAAGAACATCATGGCCAAAAAATGGAAGACATTTGAATTTCAAAAATGGTCGTTTACCATTGAAAATGTCAAATAAAGCACGTGCTATTTATGATTCTGCCAGACGCCATGGGAGAAAACTACTTGAAACTAATACTAATGAAGATAGTGTTGTGGTGAGTGATATTGTGGTTGTTAGTCAAGATGGAAGTGGAAACTTTACCACTATCAATGACGCAATAGCTGCTGCACCGAATAACACAGTTGCTAATGATGGCTACTTCTTCATTTTGATCACCCAAGGCGTGTATCAAGAGTATGTATCGATACCCAAAAACAAAAAGTACTTGATGATGGTTGGAGAAGGAATCAATCAAACAGTTATCACAGGAGATCACAATGTTGTTGATGGTTTCACAACATTCAATTCAGCCACGTTTGCTGTGGTTGGTCAAGGGTTCGTGGCAGTTAACATAACATTTCGCAACACGGCTGGACCAAGCAAACACCAAGCAGTTGCACTGAGAAGTGGAGCAGACATGTCTACCTTCTATAGTTGTAGCTTTGAAGGGTATCAGGACACATTGTATACACATTCTCTAAGGCAATTTTATCGAGAATGCGAAATATATGGAACAGTTGACTTCATATTTGGAAATGCCGCAGTTGTTTTACAAAATTGTAACATTTATCCTCGCCTTCCGCAAAGTGGACAATTCAATTCCATCACAGCTCAAGGTAGAACTGACCCGAATCAAAACACCGGAATTTCTATACAAAACGCAACTATTAAAGCAGCAGATGATTTGGGTCCCAAAGTTGGAACTGTTGAAACATACCTAGGGAGACCATGGAAAGAATATTCAAGGACAGTTTTTATGCAATCTTTCATGGATAGTTTCATAAACCCTGCTGGTTGGCATGAATGGAATGCTGATTTTGCATTGAAAACTTTGTACTATGCAGAATACGGTAACAGAGGACCGGGTTCAAGCACTGCGAATCGGGTGACATGGTCTGGTTATCATGTTATTCGTGCTACTGATGCAGCCAATTTCACAGTGTCCAATTTCTTGAGCGGTAGTGATTGGATTCCTCAAACTGGTGTACCTTTCTTGAATGGATTGATATAG 1671 0.395 MAFKHKSIAYLLSILLFVSLRVANGVPPKTICESTVDPTYCKSVLANQNGNIYDYGRISIRKSLSQSRKFMNSMDSYLQGGSSLSQSTIRALEDCQFLAELSFEYLSHTYTTTNQSSNVLPTSQAEDFETFLSAVLTNQQTCLDGLNTIASDQRVKNDLSSSLSDDMKLHSVTLALFKKGWVPKNKIRTSWPKNGRHLNFKNGRLPLKMSNKARAIYDSARRHGRKLLETNTNEDSVVVSDIVVVSQDGSGNFTTINDAIAAAPNNTVANDGYFFILITQGVYQEYVSIPKNKKYLMMVGEGINQTVITGDHNVVDGFTTFNSATFAVVGQGFVAVNITFRNTAGPSKHQAVALRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECEIYGTVDFIFGNAAVVLQNCNIYPRLPQSGQFNSITAQGRTDPNQNTGISIQNATIKAADDLGPKVGTVETYLGRPWKEYSRTVFMQSFMDSFINPAGWHEWNADFALKTLYYAEYGNRGPGSSTANRVTWSGYHVIRATDAANFTVSNFLSGSDWIPQTGVPFLNGLI* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1721 556 Pfam Pectinesterase 243 540 IPR000070 GO:0030599|GO:0042545
Mal1g1721 556 SUPERFAMILY Pectin lyase-like 238 553 IPR011050 -
Mal1g1721 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 179 IPR035513 -
Mal1g1721 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 179 IPR035513 -
Mal1g1721 556 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 10 553 - -
Mal1g1721 556 Gene3D - 240 556 IPR012334 -
Mal1g1721 556 PANTHER PECTINESTERASE 10 553 - -
Mal1g1721 556 SMART PMEI_2 23 176 IPR006501 GO:0004857
Mal1g1721 556 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Mal1g1721 556 Pfam Plant invertase/pectin methylesterase inhibitor 29 176 IPR006501 GO:0004857
Mal1g1721 556 CDD PMEI-like_3 30 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1721 Mal-Chr1 22414189 22415949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1721 7 556 Carbohydrate Esterase AT1G02810 59.756 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1721 K01051 - gmx:100786124 853.973