Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1719 ATGATGGATCTCCAGGGAGCAGTCAAAAGGGTGCATCATCAGGCACCAAAACATGATGACAACTCTATGGCTGTCACTCCTGTTACTCCAAGTGATGGCAAAATTGTTGATGTTCAGCCTCTTCAAGTTTCAAGAGATATGGTGCAGATTCCTAGTCCAAAAAGGTCTATTGTGAGAGGGGATAACCTTATAATGGACGCTATATCTAGTTTGAATGAGCTTCATGGTTCTAATGAAACAACAATTGCTGATTTTATAGAGAACCATTACAAGGTACGGGCAGACTTCAAAAAGTTGCTGTCTGCAAAACTGAAGTCTCTCACATCTAGTGGAAAACTGATCAAGATGAAACCTAGGTACATGATTGCCTCTACCTCTATGAAGCTTGACAAGGATGAGATCCATAGCCGTCCACAGTCTGAGATGGATCTCGAAGTAGAAAAGATAATGTCCATGTCTGCACGAGAGGCAGCCACATATGCTGCTCAAGCAGTTGCTGAAGCGGAAGCCTTCCTCGAGGAAGATGAGGAGGCAACAAAGGAGGCTGAGGTTGCAGAAGCGTATGCAGATGCAGCGGAAGCTGCAAGGAAAAAACTGAAGGGGAGAAGCAACCCCAAAGACGATGATCCATGCGTTTGA 639 0.4476 MMDLQGAVKRVHHQAPKHDDNSMAVTPVTPSDGKIVDVQPLQVSRDMVQIPSPKRSIVRGDNLIMDAISSLNELHGSNETTIADFIENHYKVRADFKKLLSAKLKSLTSSGKLIKMKPRYMIASTSMKLDKDEIHSRPQSEMDLEVEKIMSMSAREAATYAAQAVAEAEAFLEEDEEATKEAEVAEAYADAAEAARKKLKGRSNPKDDDPCV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1719 212 SUPERFAMILY "Winged helix" DNA-binding domain 53 128 IPR036390 -
Mal1g1719 212 PANTHER SINGLE MYB HISTONE 4 5 206 IPR044597 GO:0003691
Mal1g1719 212 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 51 131 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal1g1719 212 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g1719 212 Pfam linker histone H1 and H5 family 62 117 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal1g1719 212 Gene3D - 58 140 IPR036388 -
Mal1g1719 212 SMART h15plus2 54 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal1g1719 212 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 5 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1719 Mal-Chr1 22284202 22289452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1719 7 153 Single Myb Histone (SMH) Gene Family AT1G49950 39.535 1.11e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1719 K09422 - gmx:100780698 147.517