Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1711 ATGTGTGGTGGTGCTATCATTGCTGACTTCATTCCTCGCCGTGACGGCCGCCGTCTCACTGCCTCAGAGCTCTGGCCTAACTCATTTGGCCAACAAATTGGCTCCTCAGACTTTGATTTCTCTCATTCTGGTGGTGATCAACAACCACCCAGTGCTCTCAAAAGATCACAACCTCCCAAAGTTAGTGAACGAGTTGAAAAGCCGGTGAAAAAACAGAGGAAGAATCTCTACAGAGGGATTCGACAGCGTCCATGGGGAAAATGGGCTGCAGAGATTCGTGATCCAAGAAAAGGGGTTCGTGTTTGGCTTGGTACATTCAACACTGCTGAAGAAGCTGCCAGAGCATATGACAAAGAAGCTCGAAAAATCCGTGGCAAAAAAGCTAAGGTTAATTTCCCTAATGAAGATGATGCATATACCATTCAAGCTTCTCGTCGTTACAATAATAATCCACCACCAATTCGACCACAGAAGCTTCCTCTCTATCATCAACAACAACAACAACAGTATCCAAAGAATCTGAACTTGGAGTTTGGTTATGATCTGAACCAAACTGATACAGTTCAAAATTCTCATGTGGGTGCTATCAATACTGAACCTTTTAACATATCTGGTTCTGGTGGTGATGAGAATTCTTTATTTGGGTCTGGTTCAGGTTCTGGTTCAGAAGTTGGTTTTTCTTTGATGGAGTTCAATGGTGCTGCTAATCAGAATGAAACTGGTTATTTTGGTGGTGTTGTGAATGAACATGAAAAAGAGAAAGAGAAAGTGGAAGAACAAAAAGAGAAAGAAAAACATGTTATTGATCAAGCTGAAGCTGAATTGGCAAAGAATGAAGTGCAAGAGTTGTCTGATGAATTGTTGGCATACGAGGATTATATGAAGTTTTATCAGATTTACTATGATGGACAATCTGTGATGCCACCAAACATTGTTCAGGAACATGTGGTTGGAGATTTATGGAGCTTTGATTGA 975 0.4133 MCGGAIIADFIPRRDGRRLTASELWPNSFGQQIGSSDFDFSHSGGDQQPPSALKRSQPPKVSERVEKPVKKQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEDDAYTIQASRRYNNNPPPIRPQKLPLYHQQQQQQYPKNLNLEFGYDLNQTDTVQNSHVGAINTEPFNISGSGGDENSLFGSGSGSGSEVGFSLMEFNGAANQNETGYFGGVVNEHEKEKEKVEEQKEKEKHVIDQAEAELAKNEVQELSDELLAYEDYMKFYQIYYDGQSVMPPNIVQEHVVGDLWSFD* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1711 324 PANTHER DNA-BINDING DOMAIN 1 300 IPR044808 GO:0003700|GO:0009873
Mal1g1711 324 MobiDBLite consensus disorder prediction 35 55 - -
Mal1g1711 324 MobiDBLite consensus disorder prediction 35 71 - -
Mal1g1711 324 Pfam AP2 domain 77 125 IPR001471 GO:0003700|GO:0006355
Mal1g1711 324 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Mal1g1711 324 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Mal1g1711 324 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Mal1g1711 324 SUPERFAMILY DNA-binding domain 76 134 IPR016177 GO:0003677
Mal1g1711 324 Coils Coil 247 293 - -
Mal1g1711 324 Gene3D AP2/ERF domain 76 134 IPR036955 GO:0003700|GO:0006355
Mal1g1711 324 CDD AP2 77 134 IPR001471 GO:0003700|GO:0006355
Mal1g1711 324 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Mal1g1711 324 PANTHER EREBP TRANSCRIPTION FACTOR 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1711 Mal-Chr1 22194061 22195156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1711 1 134 AP2-EREBP Transcription Factor Family AT3G16770 55.797 5.29e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g1711 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1711 K09286 - gmx:100780763 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1711 1 22194061 22195156 Mal1g1711 1 22194061 22195156 ECH