Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1671 ATGGGAGAAGTTGTTTTGTTTGTTGATGATTTGAAATCAGTTTCAGGGTTTCATCGCTGTAGAATATGTCATGAAGAAGAATTTGAAAGCTTCAAAAGCTTAGAATCTCCTTGTGCTTGTTCTGGTACAGTTAAGTTTGCTCATAGAGATTGCATTCAGACATGGTGCAATGAGAAAGGAAATACAACTTGTGAAATTTGTCTTCAGCAATATGAACCTGGATATATAGCACCGCCACCAAAGAAACCTCAAAAGCCTGATGAAGCAATGACCATTGGCATTAGAGATAGCCTTGAAATATCATCAAGGAGGGAGGAAGAAGCTTTGAACAGAAGAATAGTTGGTATAGTTGAAGGTGTAGCAAGACAAAGCAATTACTCTCAATGCACCTATGCTACTGATAGAAGCGCATCTTGTTGTCGATCACTGGCTTTAGCTTTTACTCTCATATTACTTCTAAGACATCTTTTTGCTTTGCTTACAAATGGAATGGAAGATTATCCATTTACAATTCTTACAATCTTTATACTAAGGGCCAGTGGAATTATTATACCTATGTGCATAATTATTAGGACTATGGGAGCCATTCATAAAAGTATCCAGCGTCATTATCATCAGGATTCTGATGATGACTCATTGATATCTGATGGAGATGATGAAGAAAATGGGACACCACATATTGCAATTTTAAGACATTCACATTATTAG 708 0.3644 MGEVVLFVDDLKSVSGFHRCRICHEEEFESFKSLESPCACSGTVKFAHRDCIQTWCNEKGNTTCEICLQQYEPGYIAPPPKKPQKPDEAMTIGIRDSLEISSRREEEALNRRIVGIVEGVARQSNYSQCTYATDRSASCCRSLALAFTLILLLRHLFALLTNGMEDYPFTILTIFILRASGIIIPMCIIIRTMGAIHKSIQRHYHQDSDDDSLISDGDDEENGTPHIAILRHSHY* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1671 235 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 232 IPR033275 -
Mal1g1671 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 75 IPR013083 -
Mal1g1671 235 Pfam Protein of unknown function (DUF3675) 73 193 IPR022143 -
Mal1g1671 235 CDD RING_CH-C4HC3_MARCH 20 67 - -
Mal1g1671 235 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Mal1g1671 235 SMART ringv_2 19 68 IPR011016 GO:0008270
Mal1g1671 235 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Mal1g1671 235 SUPERFAMILY RING/U-box 18 72 - -
Mal1g1671 235 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1671 Mal-Chr1 21816918 21819647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1671 20 67 C3H Transcription Factor Family AT2G37950 44.898 7.69e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1671 - - gmx:100797029 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1671 1 21816918 21819647 Mal1g1671 1 21816918 21819647 ECH
Mal3g4688 3 126725922 126728305 Mal1g1671 1 21816918 21819647 PCT