Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1670 ATGAATTATAGTTTATCAATGGCATTACTTCGACCTTCATCTTTCATGATCTTGTTGGCATATTGTGCACTAATAGTCCTTGCTTCATTGACACCATGTTGGTATCTAATGGTCACACATATTGAGAAACATGTGAATTTGCACTCAGCAAATATTGTGTCCCAATTGCAATCAGAAATTGAGTATTCTTCTGAACTGTTGCAACCAAAAAAATCATCATCAACAAATTTATCTAGATTATTGAGTTCAACCCTTAATTCTACTAATATCACTTTCTTTGATGTTCAAACCAAGGTTGCTCCGTTATTATTTCAAGCATTGAAGACAATACCTCACTTGACACAAATCTCATACATGGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTAGGGGTGCTTCAAATAAAACCATATACTATATTCAACCCGTGAATCTTGACACTGGAGTAGTTTTTGGAGAAGCTATAGTATCTAATAACACTATCAATATTGATGCAAGTTGGATAAATGGAGCAAATAATATTTCAAATGAATTTGCATCATTGGGAACAAAGTTGAACAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAATAGTATAGGAGTGATCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATGTCACTCGCGTAATCGATCGTCAAGGGATAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTATAAAAGGAATTCAAAATATTCGTTTGATGGTTCTTAATGATAGTGTTTCATTACAATCTGTTAATGCTAATGGAGATCTTATAAGGAATGAAGGAGCTGTATCTTGCAAGAATCAAGCTGTTGGTTCTAGTTTGAATATTCAAGATACTCAATATTTGATTCATTGCTATCCTATTGATATTATGGGAATAGAATCGGTGTATGTGTTAGCAGTCCCACAAAATGGATCTCTCATCAGCTTTAATCCAAGTTATAAAGAAAAGGGGTTGATACTCTTGATTATAATGATGGTGATGATATTTATGGCTATCTTGAGTTTTCTATTCGTGAATTTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATAAAACAAAAGGAAGCCACAGAACAAGCTGAGAGAAAAAATATGAATAAGAGCCTTGCTTTTGCTAGTGCTAGCCATGATCTTCGAGCTTATCTTGCTGGCCTCATTGGTTTGATTGAAATGTCTTCTAAATTAGTCGTCTCTAATTCAAAATTGGACACTAATTTGAAACCACATTCAGAATTGGAGACCAATTTTAAACAAATGGAGAATTGTGCGCAAGATTTGCTAGGGCTGTTAAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAATTAGAGGAAGAGGAATTTGATTTATCCTATCTTCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAACTTGTATTGGACCCTTGTAATGGTTCAGTTATCAAATATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTACTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAGGCCAAATTGCAAAACTCAATAATCAAGACTAATCAAAAGAGTGTTATGAAACCTTTGTCTTGGTTGTTTAATAAGAAAGACAAAGAATGTGAGGACATAGAAGCTGTGAATTCAGTCCAACAAGATCCATGTTTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGAATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTCAAAGAGAATTCCGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTACGTTTGATGCATGGAGACATTGGAATTGTGGACAAGGAAGTTGGCAAAAAAGGAACATGCTTCAAGTTCAATGTACTTCTCACCTTATGTGAGAATGAGACAGTGACTTATAGTTTAAGGGAAGGTTTTGAGTATGGATCAACCTCAGGTGACAAAAACCAAACTCTAGAGAAAAAAACAATTCGCACAACTAGTTCTGGTTCAAGCATTTGTTCATTGAGTCCAAAACTACATATTTGCCCCTCTTCTAGTTCTAAGCCAGAACCTTCACATGTTATTCTTTATATTTCTGATGAAGAAAGAAGAAGGACTACACAATTTTTCATAGAGAGCTTAGGGGTCAAAGTTAAGGTTGTGAAGAATAGTAAACATCTAATTTATACTCTCAAGAAGATCAAAAAACACAAGGATAACCAAATGAGTGATCAAAGTTCACCAGAATCTTCAGAATTGAATTCTAGGTGTACATCTTATAATTCTTCTTGTAGTAGAAGAGTTCCTTTGAGAGCTATGGATTATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAATATTGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTAGTAAGATTGTGTCAAAGTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAAAGTAGTGTTGATTTCAAAGCAATTGATCAAGATGATATTGTGATAACAAAACCATTTCATGGTAGTAGATTGTTCCAAGTTATAAAGCTTCTTCCTGAATTTGGTGATAATTGGAAAAGCAATTCTACTAAATCAAGAAGAGAATTTAGATCACAAGTATCATCTAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATTTTGGAAGGGAACACAAAAATCCTATGCTAATAAGGGAAGAAAAGGTTATGTTCATCATGGTGAAATAGAAGAATGTGGAGATTCAAGCAATTCTAAACCTTTAAGTGGAAAGAAGTTTTTAATTGTTGATGATAGTCCAATGTTGAGAAAGATTGCTATGGCTACTTTGAGTTCCATTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGACTAGTTTGTGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGCCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACGTTATGGTCTTCACACTTCTATCATTGCATTATCTGCTGAAATTGACAAATTGACTACAGAGACTGGAATGGACTTCCACATAACCAAGCCTATTAAGAAAGAGCATTTACTCAAAGCTATTACATACATAGAAAATAGTGACATAATGTAA 3348 0.3486 MNYSLSMALLRPSSFMILLAYCALIVLASLTPCWYLMVTHIEKHVNLHSANIVSQLQSEIEYSSELLQPKKSSSTNLSRLLSSTLNSTNITFFDVQTKVAPLLFQALKTIPHLTQISYMGMEGLFFTHYNDGDQVLAMYSNSSSRGASNKTIYYIQPVNLDTGVVFGEAIVSNNTINIDASWINGANNISNEFASLGTKLNNVSDLLFMNSARINSIGVISLGFSTKAITDYVTRVIDRQGIKSYLATKDGKVIIKGIQNIRLMVLNDSVSLQSVNANGDLIRNEGAVSCKNQAVGSSLNIQDTQYLIHCYPIDIMGIESVYVLAVPQNGSLISFNPSYKEKGLILLIIMMVMIFMAILSFLFVNFGVTKREMHLCASLIKQKEATEQAERKNMNKSLAFASASHDLRAYLAGLIGLIEMSSKLVVSNSKLDTNLKPHSELETNFKQMENCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSYLLEDVVDLYHPMAMKKGVELVLDPCNGSVIKYSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQNSIIKTNQKSVMKPLSWLFNKKDKECEDIEAVNSVQQDPCFMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKKGTCFKFNVLLTLCENETVTYSLREGFEYGSTSGDKNQTLEKKTIRTTSSGSSICSLSPKLHICPSSSSKPEPSHVILYISDEERRRTTQFFIESLGVKVKVVKNSKHLIYTLKKIKKHKDNQMSDQSSPESSELNSRCTSYNSSCSRRVPLRAMDYGNEYLSSMFKKKNIGAAPSFVLIIIDANAGPFSKLSKIVSKFKKDLLNPSKVVWLEKPFESSVDFKAIDQDDIVITKPFHGSRLFQVIKLLPEFGDNWKSNSTKSRREFRSQVSSNDESVCLSVEQFWKGTQKSYANKGRKGYVHHGEIEECGDSSNSKPLSGKKFLIVDDSPMLRKIAMATLSSIGVTTIDQCENGEEAVRLVCEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKRYGLHTSIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAITYIENSDIM* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1670 1115 Gene3D - 378 472 - -
Mal1g1670 1115 CDD HisKA 393 467 IPR003661 GO:0000155|GO:0007165
Mal1g1670 1115 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 383 473 IPR036097 GO:0000155|GO:0007165
Mal1g1670 1115 SMART HKATPase_4 521 678 IPR003594 -
Mal1g1670 1115 MobiDBLite consensus disorder prediction 785 804 - -
Mal1g1670 1115 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 460 673 IPR036890 -
Mal1g1670 1115 SMART HisKA_10 395 471 IPR003661 GO:0000155|GO:0007165
Mal1g1670 1115 SMART REC_2 986 1106 IPR001789 GO:0000160
Mal1g1670 1115 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 521 676 IPR003594 -
Mal1g1670 1115 Gene3D - 965 1112 - -
Mal1g1670 1115 CDD REC_hyHK_CKI1_RcsC-like 988 1106 - -
Mal1g1670 1115 Pfam Response regulator receiver domain 989 1106 IPR001789 GO:0000160
Mal1g1670 1115 PANTHER HISTIDINE KINASE CKI1-LIKE 40 1107 - -
Mal1g1670 1115 PRINTS Bacterial sensor protein C-terminal signature 602 616 IPR004358 GO:0016310|GO:0016772
Mal1g1670 1115 PRINTS Bacterial sensor protein C-terminal signature 620 630 IPR004358 GO:0016310|GO:0016772
Mal1g1670 1115 PRINTS Bacterial sensor protein C-terminal signature 636 654 IPR004358 GO:0016310|GO:0016772
Mal1g1670 1115 ProSiteProfiles Histidine kinase domain profile. 402 678 IPR005467 -
Mal1g1670 1115 Gene3D - 473 683 IPR036890 -
Mal1g1670 1115 ProSiteProfiles Response regulatory domain profile. 987 1110 IPR001789 GO:0000160
Mal1g1670 1115 PANTHER TWO-COMPONENT HISTIDINE KINASE 40 1107 - -
Mal1g1670 1115 SUPERFAMILY CheY-like 983 1107 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1670 Mal-Chr1 21801880 21808527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1670 18 1111 Histidine Kinase Gene Family AT2G47430 38.696 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g1670 HATPase_c 2.3e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1670 - - cam:101504256 1316.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1670 1 21801880 21808527 Mal1g1670 1 21801880 21808527 ECH