Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1661 ATGGAGAAGTTACTACAAGATCTAGAGCAAGAGAATCAAGTTTTGGTATCAATTCCAAAGCTTATAAATAAGCAGGTGCCAATGCCACCAAATTCTTCTTTAGCATCATCACTTGAGCTATTGAAAAATTATGGAAGCAAGTTCAAGAAGCAAAACAACAAAAGCAATGTTGAAACTTGTGCAACTCCTCAAAAGTTGTCAACTGAAGATATAATAAGGCTTGCAGGAACAAGGTATATCCAAAACTCAACACAGTGGCATGATAATAATCTTTACATTCCTTATGGAACTGTTTTTGGAAGCTTATTGTCAGAGGAAGAAAATAAACAAGTTGAACTAGCACAGTTTGTTCTAGCAGCAGCTGAGAGAGTAGGTTGTCAACAATTTGAACGTGCAAACATGTTACTTTCACTTTTTCATCACATGAATGAAAGTGGAAATATTGGAAGCACAGTTCAGAGAGTTCTTTTCCATTTCTCTCAAACACTTCAAGAGAGAATCAACAGAGAAACAGGACGAGGAAAGATGAAACTGGGGAGAACAAATGAGAGAAACAAGGAGAAGGAATTGATTGAGAAAATGGAATTAGATACTAACATAGTAGTTGCATGTCATCAAAAAATTCCTTTCAATCAAGTAATGCAATTTGCTGGTGTGCAAGCTATAGTGGAACATGTTGCTTCACAAACCAAAATCCATCTGATTTTTCTTAATATTGGTTGTGGAGTGATGAGTACATGTTTCATGCAAGCATTAGTAGATCGAAGAGAAAAGCCAGTTGAAATTCTGAAGATCACGACCATTGGATTTTCTAACAAGGCTAAGTTAGAAGAAATTGGCCAAAGTTTAATGAGTTTTGCTCAATCCTTGAACTTAACCTTTTTATATAACATAGTTTTTGTTGAAGATGTTATGGAGGTTAAGTTAGAGCAATTTGAAATTGAAAATGATGAAGCTGTTGCTATTTACTCTCCATGTTTACTTAGGACTATGGTATCAAATTCTGATGGCTTGGAGAATTTGATGAAGGTGATAAGAAAAATGAAACCGTTTATTATGATAGTACTTGAAGTAGAAGCAAACCATAATTCACCCTTGTTTGTGAATAGGTTTGTTGAAGCATTGTTCTATTACTCAGCATTTTTTGACTGTGTTGATACATGTATAAAAGAGGATTATGAGTGTAGAATGAGGATGGAAGAAATATTATCTGAAGGGATAAGAAACATTGTTGGTTTGGAAGATGGAGAAAGGAAGGTTAGGAATGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGATATAGGATGGTGGAAACTGGATTCAGTGAGTCATCAATTTATCAAGCTAATTTGGTTACTGAAAAGTTTGATTGTGGGAAGTTTTGTACTATAGACCAAAATGGAAAGTGTTTAATAATTGGATGGAAAGGGACTCCAATTCATTCAATCTCAGCTTGGAAGTTTCTGTGA 1473 0.3483 MEKLLQDLEQENQVLVSIPKLINKQVPMPPNSSLASSLELLKNYGSKFKKQNNKSNVETCATPQKLSTEDIIRLAGTRYIQNSTQWHDNNLYIPYGTVFGSLLSEEENKQVELAQFVLAAAERVGCQQFERANMLLSLFHHMNESGNIGSTVQRVLFHFSQTLQERINRETGRGKMKLGRTNERNKEKELIEKMELDTNIVVACHQKIPFNQVMQFAGVQAIVEHVASQTKIHLIFLNIGCGVMSTCFMQALVDRREKPVEILKITTIGFSNKAKLEEIGQSLMSFAQSLNLTFLYNIVFVEDVMEVKLEQFEIENDEAVAIYSPCLLRTMVSNSDGLENLMKVIRKMKPFIMIVLEVEANHNSPLFVNRFVEALFYYSAFFDCVDTCIKEDYECRMRMEEILSEGIRNIVGLEDGERKVRNVKIDVWRRFFARYRMVETGFSESSIYQANLVTEKFDCGKFCTIDQNGKCLIIGWKGTPIHSISAWKFL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1661 490 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 488 - -
Mal1g1661 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 488 IPR005202 -
Mal1g1661 490 ProSiteProfiles GRAS family profile. 104 488 IPR005202 -
Mal1g1661 490 Pfam GRAS domain family 115 488 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1661 Mal-Chr1 21715313 21716785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1661 102 489 GRAS Transcription Factor Family AT3G03450 27.068 2.24e-41 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal1g1661 GRAS 5.6e-70 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1661 - - ccaj:109806982 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1661 1 21715313 21716785 Mal1g1661 1 21715313 21716785 ECH