Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1656 ATGGGTGGATTAGAAATGGGTCAGTGCATATTGCTGAAAACAGTGTTTATGTTATTATCTAGCACAGTGTTTATAGTTGAATGTAGTGCATATGATAGAACACTAGAAGCTTCTCATTTATCTATTTCCCCTATACATTCCATTGCTGGTTCAATTCCTTCTGTTATGGCTCATCCACCATTGCCCCCTTATCTTTCCAATTGTTGTAAAAATGGCATGGTGTTGAAACGAGGCAGTGAGGGCTGCCATTGTGTTTATCCTGTAAAGCTAGATCTTCTCCTTTTGAATGTCTCTGAAAATCCCGACTGGAATCTTTTTCTTGATGAATTGGCCGCACAATTGGGGATGCGGGCTACCCAAATTGAGTTGATAAACTTTTATGTGCACAGCTTATCGACATTGAATATATCGATGTACATTACTCCGCGAAAAGAGATCAGTTTCTCTGCCAAGGAAGCATCTAAAATAAACTCTTCCCTTTTATTTCACAAGGTTCGACTAGACAGTAGATTCGTTGGTGACTACAGGGTTCTCAATTTGACCTTTTTTAAACCTCCACCTCCTTCAAAAGCTCCTACTTTTGCTGCATCAACTGTGAAAACTCCTGAGAGACAAGTACCTACAGCTACATCATCTAGTACTTCAGACAGGGGAAGGCATTCAAATTTGCTTGTTATCCTTGGAATTGTTACCGGGATACTCATCATGTCCATTATCTGTGTACTTATACTTTGTTTATGCACGCTGAGGCCAAAAACAAAAAGACCTCCTACAGAAACTGAAAAGCCAAGGATAGAACATGCAGTTTCATCTGTTGGGTCACATCCTCACCCAACCAGTACACGTTTTATTTCTTATGAGGATCTTAGAGAGGCAACAAACAATTTTGAACCAGCAAGCATACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTGAGTGATGGAACTGCTGTTGCAATTAAGAGGCTTACTAGTGGAGGGCAGCAGGGTGACAAAGAGCTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCACCGTAACCTTGTAAAACTAGTTGGATACTATAGTAATCGTGACTCATCACAAAACCTACTTTGCTATGAGCTTGTCCCGAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATAAATTGCCCTCTGGATTGGGACACCAGGATGAAGATTGCACTTGATGCTGCAAGAGGACTTGCTTACCTGCATGAAGATTCACAGCCATGTGTTATACACAGAGATTTCAAGGCATCTAATATATTGCTTGAGAACAACTTTCATGCCAAAGTTGCTGATTTTGGTCTAGCTAAACTAGCACCTGAAGGCAGAGCTAATTACCTGTCTACTCGAGTCATGGGCACATTTGGATATGTAGCACCTGAGTATGCTATGACTGGACACCTACTCGTCAAAAGCGATGTTTATAGCTACGGAGTTGTCTTGTTAGAATTGTTAACCGGAAGGAAACCAGTTGAAATGTCGCAGCCAACTGGACAAGAGAATCTTGTAACTTGGGCAAGGCCAATTTTAAGAGATAAAGAGCGGTTAGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTATCCGAAGGATGATTTTGTCCGCGTTTGCACTATTGCTGCAGCTTGTGTTGCACCTGAAGCAAGCCAACGTCCTACAATGGGGGAAGTGGTACAGTCACTTAAAATGGTTCAGCGCATCACAGAAAATCATGATCCTGCATTACCGTCATCCAATACAAGGCCCAACCTGAGACAGTCCCCTGCCACTAATGACTCTGATGGGACATCTTCAATGTTTTCTTCTGGTCCTTACTCTGGTCTAAGTGCCTTTGACTATGACAACACTTCTAGGACAGCTGTTTTCTCTGAAGATCTTCACGAAGGACGGTGA 1923 0.4254 MGGLEMGQCILLKTVFMLLSSTVFIVECSAYDRTLEASHLSISPIHSIAGSIPSVMAHPPLPPYLSNCCKNGMVLKRGSEGCHCVYPVKLDLLLLNVSENPDWNLFLDELAAQLGMRATQIELINFYVHSLSTLNISMYITPRKEISFSAKEASKINSSLLFHKVRLDSRFVGDYRVLNLTFFKPPPPSKAPTFAASTVKTPERQVPTATSSSTSDRGRHSNLLVILGIVTGILIMSIICVLILCLCTLRPKTKRPPTETEKPRIEHAVSSVGSHPHPTSTRFISYEDLREATNNFEPASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKELLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKLAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVEMSQPTGQENLVTWARPILRDKERLEELADPRLGGRYPKDDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITENHDPALPSSNTRPNLRQSPATNDSDGTSSMFSSGPYSGLSAFDYDNTSRTAVFSEDLHEGR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1656 640 Pfam Protein kinase domain 299 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1656 640 Gene3D Transferase(Phosphotransferase) domain 1 374 589 - -
Mal1g1656 640 MobiDBLite consensus disorder prediction 254 268 - -
Mal1g1656 640 MobiDBLite consensus disorder prediction 253 278 - -
Mal1g1656 640 MobiDBLite consensus disorder prediction 194 217 - -
Mal1g1656 640 SUPERFAMILY Protein kinase-like (PK-like) 271 573 IPR011009 -
Mal1g1656 640 PANTHER OS01G0750732 PROTEIN 39 640 - -
Mal1g1656 640 MobiDBLite consensus disorder prediction 191 217 - -
Mal1g1656 640 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 39 640 - -
Mal1g1656 640 ProSiteProfiles Protein kinase domain profile. 296 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1656 640 Gene3D Phosphorylase Kinase; domain 1 259 373 - -
Mal1g1656 640 MobiDBLite consensus disorder prediction 581 611 - -
Mal1g1656 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Mal1g1656 640 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1656 Mal-Chr1 21680092 21684167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1656 42 640 Receptor kinase-like Gene Family AT4G02010 72.546 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mal1g1656 Pkinase 5.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1656 - - gmx:100792818 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1656 1 21680092 21684167 Mal1g1656 1 21680092 21684167 ECH
Mal3g4142 3 120161579 120164239 Mal1g1656 1 21680092 21684167 PCT
Mal3g4704 3 126896501 126900929 Mal1g1656 1 21680092 21684167 PCT