Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1650 ATGGAGAAGAAAGAGATGGGTGTGAGTGTGAGTGTGAAGAGTGAGGATGATATTCTTGTTGATTCTTCCTCATCTTTGCTTAATGGTTTTCAATTTTCAAGTGTCTTTGATTTCTGTGAGGTTGAAAAGAGTTCTTCTTTAGGGTTTATGGAGTTACTCGGTGTTCAAGACTATACTCCTCTCCTTGATGTACCTCAACTATCAACCATGTCTACTGTTAAAGCTTCATCTGATACTACCACCGGAAAAGAGTGTTCTGAGGTTTTGAACCAGCAACAACCTACAACTCCTAACTCTTGTTCCATTTCATCAGCATCTAGTGAAGCAGTCAATGATGAACACAACAAGACTCTTGTTGACCAACCACAAGAAGATGAAGAAGAAGAAAAGCAAAAGACCAACAAACAGTTGAAGACGAAGAAGACAAATCTAAAGAGACAGAGACAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTTGATCATCTCGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTACTATCGTTGCACCACTGCTTCATGTAATGTGAAGAAACGTGTGGAACGTTCTTTTACTGATCCAAGCATTGTAGTCACAACTTATGAAGGCCAACACACTCATCCAAGTCCAGCTATGTCCCGTTCCGCCTTTGCCGGAGTTCAAATACCACCACCCGCCGGTGTCGTCTCCGGTGGATTTCCGGCTACTAACTTTTCGTCAGGTTTACAAGGGAATAACTACTTATCACAGTATCATCATCAGCAATACCATCAACAACAGCAACCACTACTTTTTAATACATTGTCCTCTTTGAGTCACCCTTATAACAATTCTTCAACTTTTACTCAAGAGAGAAAGCTTTGTAATCCAGGGACAACTGCATTTCTTAGAGACCATGGACTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 984 0.4126 MEKKEMGVSVSVKSEDDILVDSSSSLLNGFQFSSVFDFCEVEKSSSLGFMELLGVQDYTPLLDVPQLSTMSTVKASSDTTTGKECSEVLNQQQPTTPNSCSISSASSEAVNDEHNKTLVDQPQEDEEEEKQKTNKQLKTKKTNLKRQRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSFTDPSIVVTTYEGQHTHPSPAMSRSAFAGVQIPPPAGVVSGGFPATNFSSGLQGNNYLSQYHHQQYHQQQQPLLFNTLSSLSHPYNNSSTFTQERKLCNPGTTAFLRDHGLLQDVVPSHMLKEE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1650 327 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1650 327 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 319 IPR044810 GO:0003700
Mal1g1650 327 MobiDBLite consensus disorder prediction 90 112 - -
Mal1g1650 327 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1650 327 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1650 327 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g1650 327 MobiDBLite consensus disorder prediction 113 136 - -
Mal1g1650 327 PANTHER WRKY TRANSCRIPTION FACTOR 1 319 - -
Mal1g1650 327 PIRSF WRKY_txn_fact_IIc 1 327 IPR017396 GO:0003700
Mal1g1650 327 SUPERFAMILY WRKY DNA-binding domain 155 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g1650 327 Coils Coil 123 147 - -
Mal1g1650 327 MobiDBLite consensus disorder prediction 90 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1650 Mal-Chr1 21591208 21592438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1650 34 327 WRKY Transcription Factor Family AT2G47260 47.273 2.46e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g1650 WRKY 1.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1650 - - aprc:113872234 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1650 1 21591208 21592438 Mal1g1650 1 21591208 21592438 ECH
Mal3g4711 3 126987133 126988440 Mal1g1650 1 21591208 21592438 PCT