Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1634 ATGGTTCCAAGAAGCTGTTTCCACTTCATTTTGTTTCTTCTTTCATTGTTATGCTTTAACTGCAAATCAGATATGGAGTCTGATTTTGACAAGTGGATATCATGGAATGTCAAGAGCTACCAAAGAAAGACCATTTTGGAAAAGAGATATAGGAATGTCAGTGGCAATGGGCAAGGTCTTGATCCAAAGCTGAAGAAAGCTGAGAGTAATAAAATTAGATTAACAGTTAGCCAAGATGGTAGAGCTGAATTTAAGAGCATTACAGAAGCGATTAATAGCATTCAACAGTATAACACAAGGAGAGTGATTATCTCAATTGCACCGGGTCATTATAGGGAGAAAATTGTGATTCCTAAGACATTGCCTTTCATTACCTTCTTAGGGGATGCAAGGGATCCACCGACTATAACGGGAAATGATACACGGTCTGTCACCGGAAGTGATGGGGAAGAGTTAGAAACATTCAATAGTGCAACTGTTGGCGTGAATGCTAGCTATTTTATCGCCATCAACATTAAGTTTGAGAACACTGCTTCATTTCCCATTGGATCGAAAGTAGAACAAGCTGTTGCGATTCGCATCACCGGGAATAAAGCTGCTTTTTACAATTGCACATTTTCTGGTGTTCAAGACACTCTCTACGACCACAAAGGCCTTCATTACTTCAAAAATTGCACTATTGAAGGCTCAGTTGATTTCATCTGCGGTCATGGAAGGTCACTTTACGAGGGTTGCACTATAAAATCCATAACCAAGAACGTGACCTCCATAACAGCGCAAAGTGGTAAAAGTTCATCATACGATACTGGATTTTCCTTTAAAGATAGCGTGGTAACGGGTATTGGATCAGCTTATCTTGGAAGACCATGGGGAAATTATTCACAAGTCGTTTTCTCTTACACCTACATGGACAAGATTGTTCTGTCCAAAGGATGGGAAGATTGGAATGACACAAAGCGCTACTTGAATGCAAAATATGGAGAATATAAGTGTAGTGGGCCTGGATCCAACCTCACTGGAAGAGTTCCATGGGCAAAGATACTAACGGATAAAGATGCCCAACCATTTATTGGGGTTCATTACATTGAAGGGAACACTTGGCTCATCAGCCCTTAA 1116 0.4041 MVPRSCFHFILFLLSLLCFNCKSDMESDFDKWISWNVKSYQRKTILEKRYRNVSGNGQGLDPKLKKAESNKIRLTVSQDGRAEFKSITEAINSIQQYNTRRVIISIAPGHYREKIVIPKTLPFITFLGDARDPPTITGNDTRSVTGSDGEELETFNSATVGVNASYFIAINIKFENTASFPIGSKVEQAVAIRITGNKAAFYNCTFSGVQDTLYDHKGLHYFKNCTIEGSVDFICGHGRSLYEGCTIKSITKNVTSITAQSGKSSSYDTGFSFKDSVVTGIGSAYLGRPWGNYSQVVFSYTYMDKIVLSKGWEDWNDTKRYLNAKYGEYKCSGPGSNLTGRVPWAKILTDKDAQPFIGVHYIEGNTWLISP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1634 371 Gene3D - 68 370 IPR012334 -
Mal1g1634 371 PANTHER PECTINESTERASE 21 369 - -
Mal1g1634 371 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 21 369 - -
Mal1g1634 371 SUPERFAMILY Pectin lyase-like 72 368 IPR011050 -
Mal1g1634 371 Pfam Pectinesterase 74 365 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1634 Mal-Chr1 21399795 21402361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1634 74 368 Carbohydrate Esterase AT5G47500 45.791 1.17e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1634 K01051 - cit:102614801 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1634 1 21399795 21402361 Mal1g1634 1 21399795 21402361 ECH
Mal3g4279 3 122102111 122104555 Mal1g1634 1 21399795 21402361 PCT