Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1633 ATGGATACCAATTACAAAACCAATATTCATGTAATGAGGAGTTTATCAGATTGTGGTTCATCTGTAACAAATGCAAGTGAAGAAGATGTTATGGTAATAAAGAAAGGTCCATGGACAGAGGAGGAAGATACTATTCTTGTGAACCATGTGGCTGTCCACGGCGAAGGTCAATGGAACTCCGTTGCTCGATGTTCAGGTCTAAAGCGAACAGGAAAAAGCTGCAGATTAAGATGGTTGAATTACTTGCGTCCAAATGTTCGACGTGGGAATATCACTCTCCAAGAACAGCTCTTGATTCTTGATCTTCATTCCCGCTGGGGCAATCGGTGGTCTAAAATTGCGGAACAATTACCAGGAAGAACGGACAATGAAATAAAGAACTATTGGAGGACAAGAGTGGTGAAGCAAGCTAGGCAGCTCAAATGTGATGTAAACAGCAAACAGTTTAGAGACACATTGCGTTTGGTATGGATTCCACGCCTCATCGAGAGGATCCAATCTAGTACTCGTGCAACTACAGAAACTAATTCCTATGACCAACGACAAACCACTACTTGCTACAATACTAAAGCGCACAGTGAAACTTGTGGGACAAATGCAAATCCTCCCATGTTGTTGTCTGAGGTTTCATCGTACTCATCACAGGTTGATGCTGTAACAGAACCAAAGGTATCTTACAATTTAATGGATTGTGCGGAACTTGGATCCACGTGGCAGGAGTGGAACTGCTTGGACTCAAACATCCAAGGATTTGAACAGGACAATGGTTTTGGTGGTTTAGAATTGTGGACAGATGAAAACATATGGTTCTTGCAGCAGCAACTTGCTGATGATTTATGA 840 0.4214 MDTNYKTNIHVMRSLSDCGSSVTNASEEDVMVIKKGPWTEEEDTILVNHVAVHGEGQWNSVARCSGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQARQLKCDVNSKQFRDTLRLVWIPRLIERIQSSTRATTETNSYDQRQTTTCYNTKAHSETCGTNANPPMLLSEVSSYSSQVDAVTEPKVSYNLMDCAELGSTWQEWNCLDSNIQGFEQDNGFGGLELWTDENIWFLQQQLADDL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1633 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 137 IPR017930 -
Mal1g1633 279 ProSiteProfiles Myb-like domain profile. 34 82 IPR001005 -
Mal1g1633 279 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Mal1g1633 279 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Mal1g1633 279 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Mal1g1633 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 86 IPR017930 -
Mal1g1633 279 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 23 272 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal1g1633 279 Gene3D - 92 133 - -
Mal1g1633 279 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 23 272 - -
Mal1g1633 279 SUPERFAMILY Homeodomain-like 33 129 IPR009057 -
Mal1g1633 279 CDD SANT 92 131 IPR001005 -
Mal1g1633 279 SMART sant 34 84 IPR001005 -
Mal1g1633 279 SMART sant 87 135 IPR001005 -
Mal1g1633 279 Gene3D - 36 87 - -
Mal1g1633 279 CDD SANT 37 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1633 Mal-Chr1 21393964 21395045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1633 33 278 MYB Transcription Factor Family AT2G47190 49.231 5.94e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g1633 Myb_DNA-binding 3.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1633 K09422 - gmx:100777932 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1633 1 21393964 21395045 Mal1g1633 1 21393964 21395045 ECH