Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1632 ATGGATAATAAGGTTAAGAAAACTGGGTCTGCAAAGGAAAACGAGACGGGCTTAAGAAAAGGTCCATGGACGTTGGAAGAGGACACTATTCTGGTTAATTACATTACAACCCACGGTGAAGGTCACTGGAATACCCTCGCATCTTCTGCAGATTTGAGGAGAAGTGGGAAAAGTTGTAGATTAAGGTGGCTAAACTATTTGCGTCCGGATGTACGCCGTGGAAATATCACACTTGAAGAACAGATATTGATTCTTGATCTCCACTCTCGCTGGGGCAATAGGTGGTCGAAAATTGCACAACATCTACCAGGAAGAACAGACAATGAAATAAAAAACTATTGGAGGACAAGAGTGATCAAGCAAGCAAAGCAGCTCAAGTGTGATGTCAACAGCAAACAATTCAGAGATGTATTACGTCACGTCTGGATGCCCCGATTACTCGAACAAGTTCAACCCGCTCCAAAATTTCTTGACCCGGATAACCCAAACGGATCCAATATCCTTCTTCACCAAAACACATTGCACAGTTCAGTTTCAGAAACAGAGTATCCAAAACCAAACAACTCCTCAAGTGCCAGTGCTAATTCCTGTGACTCATCATCAGTGGAATTTCAAGTTCCTTCGAATTCAGAGTTGTTAGGTCATGATAGCTCAAAAGTATGGTCAAGTTTCAATAACCAGCTTTTAGAACAGGGGAACATTGGTGCTGGTGATGGTGACTCCTTGGAGAGTTTGTGGAATGATGAGAACATGTGGTTTATGCAACAACTTTATGAAGATCTTGAAATAAAATACAATTTACTTGCGTGA 810 0.416 MDNKVKKTGSAKENETGLRKGPWTLEEDTILVNYITTHGEGHWNTLASSADLRRSGKSCRLRWLNYLRPDVRRGNITLEEQILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDVLRHVWMPRLLEQVQPAPKFLDPDNPNGSNILLHQNTLHSSVSETEYPKPNNSSSASANSCDSSSVEFQVPSNSELLGHDSSKVWSSFNNQLLEQGNIGAGDGDSLESLWNDENMWFMQQLYEDLEIKYNLLA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1632 269 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Mal1g1632 269 SUPERFAMILY Homeodomain-like 17 114 IPR009057 -
Mal1g1632 269 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Mal1g1632 269 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Mal1g1632 269 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 260 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal1g1632 269 Gene3D - 77 118 - -
Mal1g1632 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Mal1g1632 269 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Mal1g1632 269 CDD SANT 77 116 IPR001005 -
Mal1g1632 269 CDD SANT 22 67 IPR001005 -
Mal1g1632 269 Gene3D - 20 72 - -
Mal1g1632 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 67 IPR017930 -
Mal1g1632 269 SMART sant 19 69 IPR001005 -
Mal1g1632 269 SMART sant 72 120 IPR001005 -
Mal1g1632 269 MobiDBLite consensus disorder prediction 178 202 - -
Mal1g1632 269 PANTHER MYB TRANSCRIPTION FACTOR 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1632 Mal-Chr1 21373004 21374354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1632 18 150 MYB Transcription Factor Family AT1G48000 75.188 1.20e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g1632 Myb_DNA-binding 6.8e-13 CL0123