Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1622 ATGGTGGCTGAAGCAGAGGTTGTTGTGTGTCAACAAAGCGTGGATGTGAAGTATTTTTCGAATAAAGGGAGTAATATAAACGAGATCGGTGATGCAGATTCGAATTTTGATCGAGTTCGTGTTTCTGAATCAGTTTCTGCTGAGTTACTTACTTCAAAAGAAGATGTTAAGACTGCAGACATAATCTCAGAGGCAGCTCTTGAATCTGCGGTTCTGCAATTTGTCCCAAGCATTCGTTCTGGTAGTTTTGCTGACATTGGGCCGCGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCATCTCATATGGGATCACTATATAATTTTCCTAAACCAAGTGCCTTTTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAATGTTCTAAAATTCTTCTTTGAGGATGTCAATTTCCCTCGGATATCTGAAGTTGATAATGTATTTTTACAAGACGTAGAGAATTCCCTCAGAAAGGCTTTTCTTTTGGCAGACTCAGCTTTGGCTGATGATTGCAGTGTGAACACTTCATCAGGGACCACAGCTCTTACTGCTTTGATATTTGGAAGGCTTCTAATGGTGGCAAATGCCGGTGACTGCCGAGCAGTTCTCAGTCGGAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATTTATCCATCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGCTACGTAGAGGATGGTTATCTTAATGGCGTTTTATCAGTTACGAGAGCACTAGGGGACTGGGACATGAAGTTACCTAGGGGTACTCCCTCACCTTTGATTGCAGATCCTGAGTTCCGCCAAGTGGTGCTAACAGAGGATGACGAATTCCTCATCATAGGATGTGATGGCATCTGGGATGTGATGACAAGTCAGCACGCTGTTAGCCTTGTTCGTAAAGGTTTGAGGAGGCATGATGACCCAGAGAAGTGCGCCAGGGATCTGGTTATGGAGGCATTACGGCTCAACACATTTGACAATCTTACCGTGATCATCGTATGCCTCTCTTCCCTGGATCATGGGGAGTCAGAGCCATCACCATCTCCCCAACGGAAATTAAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGAAGCTTGTTGGAAGGCGCTAACAACTGA 1170 0.447 MVAEAEVVVCQQSVDVKYFSNKGSNINEIGDADSNFDRVRVSESVSAELLTSKEDVKTADIISEAALESAVLQFVPSIRSGSFADIGPRRYMEDEHIRIDDLSSHMGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKNVLKFFFEDVNFPRISEVDNVFLQDVENSLRKAFLLADSALADDCSVNTSSGTTALTALIFGRLLMVANAGDCRAVLSRKGEAIDMSQDHRPIYPSERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGTPSPLIADPEFRQVVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCLSSLDHGESEPSPSPQRKLRCCSLSAEALCSLRSLLEGANN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1622 389 Pfam Protein phosphatase 2C 89 341 IPR001932 -
Mal1g1622 389 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Mal1g1622 389 ProSiteProfiles PPM-type phosphatase domain profile. 79 349 IPR001932 -
Mal1g1622 389 CDD PP2Cc 78 349 IPR001932 -
Mal1g1622 389 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 371 - -
Mal1g1622 389 PANTHER PROTEIN PHOSPHATASE 2C 1 371 IPR015655 GO:0004722|GO:0006470
Mal1g1622 389 SMART PP2C_4 69 347 IPR001932 -
Mal1g1622 389 SUPERFAMILY PP2C-like 73 351 IPR036457 -
Mal1g1622 389 Gene3D - 67 355 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1622 Mal-Chr1 21165347 21167773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1622 92 386 PP2C-type Phosphatase Gene Family AT3G62260 69.257 5.01e-153 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Mal1g1622 PP2C 3.9e-65 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1622 K14803 - gmx:100785388 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1622 1 21165347 21167773 Mal1g1622 1 21165347 21167773 ECH