Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1618 ATGGAGGATAGAATGGGTGGTGAAGGTTATCATTTTTATGGTGTTGGTGGTTCATCTGATTTGAGTGGAATGGGGAAGAGGCCAAGAGAATGGAATTTGAATGATTGGAGATGGGATGGTGATTTGTTCATAGCTAGCCGTGTGAATCCGGTGCCGGCGGGTGGTCCGGGAGTTGGACAACAATTTTTCCCTCTCCGGTCTGGGATTCCGGTGGTTGGTGGTTCCTCCAACACCACCTCTTCTTCATGCTCTGAGGAAGGAGATCTTGAGAAAGGGAACAAGGAAGGGGAGAAGAAAAGGAGAGTTATTGTACTGGATGATGATGGTTTGAACGATGAAGCTGGTGCCCTTAGCTTGAATCTTGCTGGACATGCTTCACCAGTGGTGGAAAGGGATGGCATGAATGGAAAAAAGGGCAGAGTAGCTGGAGGTAGTTCGAATCGAGCTGTTTGTCAGGTTGAAGACTGTGGTGCAGATCTGAGTAGAGGTAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCATTCTAAGGCCAGTAGGGCACTTGTGGGAAATGCAATGCAGAGGTTTTGTCAACAGTGTAGCAGATTTCACATGCTTCAAGAGTTCGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCTGGCCATAATAAACGAAGAAGGAAAACAAATCATGAAGCTGTTCCTAATGGAAGTCCAACAAATGATGATCAGACTAGTAGTTATTTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGCCTACAGATCAGGATCTATTAACTCATCTTCTAAGGAGTCTTGCTAGTCAGAATGATGAACAAGGGACCAGGAACTTGTCAAACCTTTTGCGGGAACAAGAAAATTTGTTGAGAGAAGGAGGTTCTTCAAGGAAGTCAGAGATGGTGTCAGCTTTATTCTCCAATGGTTCTCAAGGCTCTCCAACTGCTATAACACAACATCAAAATGTATCTATGAATAAAATGCATCAAGAAATGGTGCATACGCATGATGTTAGGACCGCTGATCATCAGCTCATATCTTCAATAAAGCCCAGCATTTCAAACAGTCCTCCGGCTTACTCAGAAGCCAGAGATAGTAGTGGACAAATAAAGATGAATAATTTTGATTTGAATGACGCATATATTGACTCAGATGATGGCACGGAAGATCTAGAAAGATTGCCAGTCTCTACAAATCTTGGCACTAGCTCTGTTGACTACCCATGGACACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAATCCCCTTCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACTGACAGAATTGTTTTTAAACTCTTCGGTAAAGAGCCAAATGAATTTCCTCTTCTACTTAGAGCTCAGATTCTAGACTGGCTATCCCACAGTCCTACTGATATTGAGAGCTACATACGGCCTGGTTGTATTGTTTTGACTATATATCTGCGTCAGGATGAGGCTGTGTGGGAGGAACTTTGCTGTGATCTGACTTTCAGTTTGAGTAAGCTGCTGGATGTCTCAGATGAGGCGTTTTGGAGAACTGGATGGGTTCATATCAGGGTGCAGCATCAAATGGCATTCATTTTCAATGGTCAAGTTGTCATAGATACATCACTACCTTTCAGAAGTAACAATTGTAGCAAGATTTGGTCTGTTAGTCCAATTGCTGTACCGGCATCAAAGAGAGCTCAATTTTCTGTTAAAGGTGTCAATCTGATGCGCCCTGCCACGAGGTTAATGTGTGCTTTAGAAGGAAAATATCTGGTCTGTGAAGATGCTCGTGAATCAACGGATCAATACTCCGAGGAGCTTGATGAACTTCAGTGCATCCAATTTTCATGTTCTGTCCCTGTGACAAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGTAGCTTCTTTCCTTTCATAGTGGCAGAAGAGGATGTTTGCTCAGAGATCCGTGTGCTTGAACCTCTTCTAGAATTAAGTGAAAACAATCCAGATATCGAAGGGACTGGAAAAATTAAAGCCAAAAGTCAAGCCATGGATTTCATTCATGAAATGGGCTGGATTCTTCACAGAAGCCAATTGAAATATAGGATGGTTCACTTGAACTCTGGTGTAGATCTCTTTCCATTGGAACGGTTCACGTGGCTTATGGAGTTTTCCATGGACCGTGATTGGTGTGCAGTGGTGAAAAAACTGTTGAGCCTACTCCTTGATGAAACTGTGAATAAAGGAGATCACCCTACCCTATATCAAGCACTTTCAGAGATGGGTCTTCTTCACAGAGCTGTAAGGAAAAATAGCAAGCAGTTAGTGGAGCTGCTTTTGAGATATGTTCCTGAAAATACATCTGATGAACTACGACCTGAAGACATGGCACTAGTTGGTGGAGAGAATCATAGCTACTTGTTTAGACCTGATGCTGTTGGTCCTGCCGGTTTGACACCACTCCATATAGCAGCGGGGAAAGATGGTTCTGAGGATGTACTGGATGCTCTGACTAATGATCCTCGCATGGTGGGAATTGAGGCATGGAAGAATGCCCGTGACAGTACAGGCTCCACACCTGAGGATTATGCACGATTACGTGGCCATTATACTTACATTCACTTGGTGCAGAAAAAAATTAACAAGACACAAGGAGCAGCTCATGTGGTGGTTGAGATTCCCAGCAATACGACAGAGAGCAATAAAAACCCGAAGCAAAATGAGTCATTCACTAGCTTAGAGATTGGAAAAGCTGAAGTAAGACGTAGCCAAGGGAACTGTAAGCTTTGTCATACTAAAATTTCTTGTAGAACTGCAGTAGGAAGGTCTATGGTATACAGACCTGCAATGCTCTCTATGGTGGCCATAGCAGCAGTATGTGTTTGTGTGGCTCTTCTGTTTAAGAGCTCACCTGAAGTTCTATACATGTTCCGACCTTTCAGATGGGAATCATTGGATTTCGGAACAAGCTAA 3024 0.4315 MEDRMGGEGYHFYGVGGSSDLSGMGKRPREWNLNDWRWDGDLFIASRVNPVPAGGPGVGQQFFPLRSGIPVVGGSSNTTSSSCSEEGDLEKGNKEGEKKRRVIVLDDDGLNDEAGALSLNLAGHASPVVERDGMNGKKGRVAGGSSNRAVCQVEDCGADLSRGKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEAVPNGSPTNDDQTSSYLLISLLKILSNMHSDRSDQPTDQDLLTHLLRSLASQNDEQGTRNLSNLLREQENLLREGGSSRKSEMVSALFSNGSQGSPTAITQHQNVSMNKMHQEMVHTHDVRTADHQLISSIKPSISNSPPAYSEARDSSGQIKMNNFDLNDAYIDSDDGTEDLERLPVSTNLGTSSVDYPWTQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNEFPLLLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQDEAVWEELCCDLTFSLSKLLDVSDEAFWRTGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNCSKIWSVSPIAVPASKRAQFSVKGVNLMRPATRLMCALEGKYLVCEDARESTDQYSEELDELQCIQFSCSVPVTNGRGFIEIEDQGLSSSFFPFIVAEEDVCSEIRVLEPLLELSENNPDIEGTGKIKAKSQAMDFIHEMGWILHRSQLKYRMVHLNSGVDLFPLERFTWLMEFSMDRDWCAVVKKLLSLLLDETVNKGDHPTLYQALSEMGLLHRAVRKNSKQLVELLLRYVPENTSDELRPEDMALVGGENHSYLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPRMVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKINKTQGAAHVVVEIPSNTTESNKNPKQNESFTSLEIGKAEVRRSQGNCKLCHTKISCRTAVGRSMVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFRPFRWESLDFGTS* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1618 1007 Coils Coil 612 632 - -
Mal1g1618 1007 Pfam SBP domain 151 224 IPR004333 GO:0003677
Mal1g1618 1007 MobiDBLite consensus disorder prediction 216 241 - -
Mal1g1618 1007 SUPERFAMILY SBT domain 149 229 IPR036893 GO:0003677|GO:0005634
Mal1g1618 1007 SUPERFAMILY Ankyrin repeat 749 892 IPR036770 -
Mal1g1618 1007 Gene3D - 749 910 IPR036770 -
Mal1g1618 1007 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 18 1006 - -
Mal1g1618 1007 MobiDBLite consensus disorder prediction 73 96 - -
Mal1g1618 1007 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 18 1006 IPR044817 GO:0003677
Mal1g1618 1007 Gene3D - 141 212 IPR036893 GO:0003677|GO:0005634
Mal1g1618 1007 ProSiteProfiles Zinc finger SBP-type profile. 148 225 IPR004333 GO:0003677
Mal1g1618 1007 MobiDBLite consensus disorder prediction 412 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1618 Mal-Chr1 21141184 21147930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1618 1 1007 SBP-box Gene Family AT3G60030 54.820 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mal1g1618 SBP 1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1618 - - gmx:100809806 1609.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1618 1 21141184 21147930 Mal1g1618 1 21141184 21147930 ECH