Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1614 ATGGAAAGAAAAATATTTGTCTCTGGTATTTCTCTCATTCTTGTTGTAGGTGTTGCCCTAGGTGTTGTTGCTCTTGTCAGAAACCAACCCGGTGGCAATGTTCCCGCTGATGGTAATGATTTGAATGCACATACTAAAGCTGTTAAAGCTGTGTGTCAAAACAGCGATGACCAAAAATTTTGTGTGGATACTCTTAATCCTGTAAACACCTCAGACCCGAATGATTACATTAAAGCAGTGGTAAAAACTTCTATGGAAAGTGTCATCAAAGCCTTCAACATGAGCGATAAGCTCGCAGTTGAAAACGGAAAAAATAACCAAACTACTAAAATGGCACTTGATGATTGCAAAGACTTATTACAATTCGCGATTGACGAATTAGAAGCCTCGAGTATTTTAGTTAATGATAACAATCGCAATGTTAATGATCGCGCTGCAGACCTTAAAAATTGGTTAGGTGCTGTTTTTGCCTATCAACAATCATGTCTTGACGGTTTTGACACGGATGGCGAAAAGGAGGTTCAATCAAAATTGCAAACGGGTAGTTTGGATAATGTAGGAAAACTTACGGCGTTAGCACTTGATGTTGTGTCTGCGATCTCAGAAGTACTCTCTGCATTGAACTTGGATTTTAATGTGAAACCTTCGTCTAGACGGCTTTTTGAGGTGGATGAAAATGGTTATCCAGAATGGATGTCCGGTGCAGATCGTAAGTTGTTAGCTGATATGAGTACGGGAATGTCTGTTACGCCTAACGTGGTTGTTGCGAAAGATGGTAGTGGCAAATTTAAAACGGTTCTTGATGCTATTAATTCTTACCCCAAAAACCATCAAGGCAGATATGTCATCTATGTTAAGGCTGGTGTCTATGACGAATATATTCAGGTTGACAAGAGTAAGAAGAATATATTAATATACGGTGATGGCCCTACAAAGACCGTTATCACTGGGCGTAAAAATTTTGTAGATGGTTGGAAGACTATAAAAACCGCTACATTCTCTACTGTTGCGGAAGGTTTCATTGCAAAGTCAATGGCATTTGAGAACACAGCGGGAGCAAACAAACACCAAGCAGTAGCGCTTCGCGTGCAAGGCGACCGATCAGTTTTCTTCGATTGCGCCATACGAGGTTACCAAGACACATTGTACGCACACGCCCACCGTCAATTCTACAGAAACTGCGAAATTTCAGGCACAGTGGATTTCATTTTCGGCTACGCATCAACATTAATACAGAGCTCAAAGATCATAGTTCGAAAACCGGATGCAAATCAACAAAACATAGTTGTAGCTGATGGAACAGTCCAAAAGAACATGCCAACAGGAGTAGTAATTCAGAATAGTGAGATCATGCCAGAGGCAGCATTACAAGCTGATAGATTGAAGGTGAAATCGTATTTAGCAAGACCATGGAAGGCATATTCTAGGGCAATATTTATGGAAAATACCATTGGTGATTTAATTCAACCAGATGGATATCTTCCTTGGTCAGGGAATCAATTCCTTGACACATGTTACTTTGCTGAGTATGCTAACACTGGACCTGGTTCAAATGTTAACACAAGAGTTAAGTGGGGGAAGGGTGTTCTTAGCAAAGCTGATGCAACTAAATATACTGCTGATCAATGGATCCAAGGTGGCATATGGTTGCCTGCCACTGGTGTACCCTTTGATCTTGGATTCACTAAATAA 1692 0.406 MERKIFVSGISLILVVGVALGVVALVRNQPGGNVPADGNDLNAHTKAVKAVCQNSDDQKFCVDTLNPVNTSDPNDYIKAVVKTSMESVIKAFNMSDKLAVENGKNNQTTKMALDDCKDLLQFAIDELEASSILVNDNNRNVNDRAADLKNWLGAVFAYQQSCLDGFDTDGEKEVQSKLQTGSLDNVGKLTALALDVVSAISEVLSALNLDFNVKPSSRRLFEVDENGYPEWMSGADRKLLADMSTGMSVTPNVVVAKDGSGKFKTVLDAINSYPKNHQGRYVIYVKAGVYDEYIQVDKSKKNILIYGDGPTKTVITGRKNFVDGWKTIKTATFSTVAEGFIAKSMAFENTAGANKHQAVALRVQGDRSVFFDCAIRGYQDTLYAHAHRQFYRNCEISGTVDFIFGYASTLIQSSKIIVRKPDANQQNIVVADGTVQKNMPTGVVIQNSEIMPEAALQADRLKVKSYLARPWKAYSRAIFMENTIGDLIQPDGYLPWSGNQFLDTCYFAEYANTGPGSNVNTRVKWGKGVLSKADATKYTADQWIQGGIWLPATGVPFDLGFTK* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1614 563 PANTHER PECTINESTERASE 5 561 - -
Mal1g1614 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 200 IPR035513 -
Mal1g1614 563 Pfam Pectinesterase 252 546 IPR000070 GO:0030599|GO:0042545
Mal1g1614 563 TIGRFAM PME_inhib: pectinesterase inhibitor domain 41 196 IPR006501 GO:0004857
Mal1g1614 563 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Mal1g1614 563 Pfam Plant invertase/pectin methylesterase inhibitor 47 195 IPR006501 GO:0004857
Mal1g1614 563 SUPERFAMILY Pectin lyase-like 249 559 IPR011050 -
Mal1g1614 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 201 IPR035513 -
Mal1g1614 563 Gene3D - 246 561 IPR012334 -
Mal1g1614 563 CDD PMEI-like_3 50 201 - -
Mal1g1614 563 PANTHER PECTINESTERASE 5 561 - -
Mal1g1614 563 SMART PMEI_2 43 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1614 Mal-Chr1 21091164 21093111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1614 2 561 Carbohydrate Esterase AT3G05610 40.354 3.48e-140 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4748 3 127508807 127510791 Mal1g1614 1 21091164 21093111 PCT
Mal1g1614 1 21091164 21093111 Mal3g4747 3 127454731 127456717 PCT