Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1610 ATGAATGGTGGTGTTGATGAGATAGGGAATAATCATAATCATGATGAAGCAACAACGTCAGAGAAGAAAGATAGAGAAGAAACAAGTACAAATGTTGTTACAAACGGTGGTGAAAAGGACAAAACAAAAGAAAAACAAGAGACAGTACCATTTCACAAATTATTCACTTTTGCAGATTCCACTGACATTTTATTAATGATTGTTGGTACTATCGGTGCTATTGGAAACGGTTTGGGTTTACCTCTTATGACATTATTGTTCGGTCAAATGATTGATAGTTTTGGTAGTAACCAAAGTAACACCACCGATGTTGTTGATCAAGTGTCCAAGGTTTCTTTGAAATTTGTATATTTGGCAGTAGGATCTGGGGTGGCCGCATTTCTCCAGGTGAGTTGTTGGATGGTTACTGGAGAAAGACAAGCTGCAAGAATAAGAGGATTGTATTTGAAAACAATATTAAGACAAGATGTTACTTTCTTTGATAAAGAAACAAACACAGGAGAAGTTGTAGGAAGAATGTCTGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTTGGGAAGTTTCTGCAGCTAATAGCAACATTTATTGGGGGGTTTGTGATAGCATTTACCAAAGGGTGGCTTCTTACTGTTGTGATGATGTCAACACTTCCACTTCTTGTAATGTCAGGAGCTGCCATGGCTGTTATCATAGGCAGAATGGCTTCTAAAGGTCAAACTGCTTATGCAAAAGCTGCACATGTTGTTGAACAGACAATCGGCTCAATAAGAACGGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTTTTGAAGGTACTATAGCTGGAGCAGGCTTAGGAACAGTTATGTTTGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGTGCAAAGATGATCATGGAAAAAGGATATAACGGCGGCACCGTGATTAATGTGATCATCGCCGTGTTAACTGCTTCCATGTCTCTTGGCCAGGCATCACCAAGTATGAGTGCTTTTGCCGCGGGTCAGGCGGCGGCTTACAAAATGTTTGAAACAATTAAGAGAAAGCCAGATATAGATGCTTATGATCCAAATGGAAAAGTATTAGAGGATATTCAAGGTGAAATAGAGTTGAAGGAAGTTTATTTCAGTTATCCCGCAAGACCTGAGGAGCTGATATTCAATGGATTCTCTCTTCATATATCAAGCGGAACAACTGCAGCATTGGTTGGACAAAGTGGAAGTGGAAAGTCCACAGTTATTAGTTTGGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGAATTAACATGAAAGAATTTCAGCTCAGGTGGATCAGAGGGAAAATTGGTCTTGTCAGCCAAGAGCCAGTGTTATTTGCATCCAGCATTAAGGATAACATTGCATATGGTAAAGATGGAGCAACAATTGAAGAAATAAGATCTGCATCTGAACTTGCAAACGCTGCCAAATTCATTGATAAACTTCCACAGGGATTGGACACAATGGTTGGTGACCATGGAACTCAACTGTCTGGTGGACAGAAGCAGCGCATTGCGATTGCACGAGCAATTCTTAAGAATCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAAAGGGTGGTGCAAGAGGCTCTGGATAGAATCATGGTCAACAGAACCACAGTTGTCGTTGCACATCGCTTAAGCACAGTGAGGAATGCTGACATGATTGCTGTAATTCATAGAGGGAAAATGGTTGAGAAAGGAACACACTCTGAATTACTGAAGGATCCTGAAGGAGCTTATTCACAACTCATACGGTTACAAGAAGTAAACAAGGAATCAGAAGAAACTACAGACCATAACAGCAAGAGAGAACTTTCTGCAGAGTCCTTTAGACAGTCGAGTCAAAGGAAGTCACTTCAAAGATCTATCAGTAGGGGATCATCTATGGGGAATAGTAGTCGACATTCATTTTCGGTTTCGTTCGGTTTACCAACAGTAGTTAATGTCACCGATCCTGACATTGAAAACCTACCAGCCAAAGAAAAAGAACAAGAAGTTCCACTGAGACGCCTTGCTTCCCTTAACAAGCCAGAGATTCCTGTTCTTCTTATTGGAAGTTTAGCTGCCATAGCAAACGGTGTAATACTTCCAATATTCGGCGTTTTGATCTCCAGTGTCATCAAAACTTTTTACGAACCGTTCGATGAGATGAAGAAGGACTCCAAGTTTTGGGCAATAATGTTTATGCTCCTTGGTCTTGCATCATTGGTGGTGATTCCAGCGCGAGGTTACTTTTTCTCTGTGGCTGGATGCAAATTAATCCAGCGGATCAGGCTAATATGTTTTGAGAAGGTGGTGAATATGGAGGTTGGTTGGTTCGATGAGCCTGAAAACTCGAGCGGCGCAGTTGGTGCAAGGCTCTCAGCAGATGCTGCTTCCGTACGTGCCCTTGTTGGCGATGCACTTGGACTGTTGGTTCAAAATTTGGCATCTGCATTGGCTGGTTTGATTATTGCTTTCATTGCGAGCTGGCAGCTGGCGTTAATTATTCTTGTCTTGATTCCGCTGATTGGATTAAATGGTTATGTTCAAATGAAATTCATGAAGGGATTCAGCGCAGACGCAAAGATGATGTACGAGGAGGCTAGCCAAGTTGCAAATGATGCAGTTGGAAGCATAAGAACCGTGGCTTCTTTCTGCGCTGAAGACAAAGTTATGGAACTATATAGGAAGAAATGTGAAGGTCCTATGAAAACAGGAATAAGGCAAGGGATAATCAGTGGATCAGGATTTGGTGTTTCATTTTTCTTATTGTTTAGTGTCTATGCAACCAGTTTCTACGCAGGAGCTAGACTTGTGAAAGCAGGGGATACAACATTTTCAGATGTTTTCCGGGTTTTCTTTGCGTTAACTATGGCAGCTATTGGTATTTCTCAGTCAAGTTCCTTTGCTCCTGATTCCAGCAAAGCAAAGTCAGCAACTGCTTCCATATTTGGAATGATTGATAAGAAGTCAAAGATTGATCCAAGTGAAGAATCTGGTACCACTCTAGATAGCGTTAAGGGCGAAATTGAGCTTCGTCATGTAAGCTTCAAGTATCCATCTCGGCGTGATATTCAGATTTTCCGAGACCTCAACTTGACCATCCATTCTGGCAAGACAGTAGCACTTGTTGGTGAAAGTGGAAGTGGGAAATCAACGGTGATTGCTTTGTTGCAAAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGATGGGATAGAAATTCGTCAGTTACAGCTAAAGTGGTTAAGGCAACAAATGGGTCTTGTAAGCCAAGAGCCAATATTATTCAATGACACTATTCGTGCCAACATTGCTTATGGAAAAGATGGTAATGCAACTGAGGCAGAAATCATTGCTGCATCTGAATTGGCCAATGCTCATAGATTCATTAGTGGCTTACAACAGGGCTATGATACTATAGTGGGAGAGAGGGGAACTCAATTATCAGGTGGGCAGAAACAAAGGGTAGCCATTGCACGTGCAATAATAAAAAGTCCAAAGATTTTGCTACTTGATGAGGCCACAAGTGCATTAGATGCTGAGTCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTCATGGTAAATAGGACCACTGTGGTTGTGGCACATCGTTTATCTACAATTAAAAATGCAGATGTTATTGCTGTTGTCAAGAATGGAGTTATTGTGGAAAAAGGAAGACATGAAACACTAATTAACGTTAAAGATGGATTTTATGCTTCCTTAGTCCAACTTCACACTAGTGCTAAAACAGTATAG 3873 0.4087 MNGGVDEIGNNHNHDEATTSEKKDREETSTNVVTNGGEKDKTKEKQETVPFHKLFTFADSTDILLMIVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQSNTTDVVDQVSKVSLKFVYLAVGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFTKGWLLTVVMMSTLPLLVMSGAAMAVIIGRMASKGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVFEGTIAGAGLGTVMFVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFETIKRKPDIDAYDPNGKVLEDIQGEIELKEVYFSYPARPEELIFNGFSLHISSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINMKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKDGATIEEIRSASELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNKESEETTDHNSKRELSAESFRQSSQRKSLQRSISRGSSMGNSSRHSFSVSFGLPTVVNVTDPDIENLPAKEKEQEVPLRRLASLNKPEIPVLLIGSLAAIANGVILPIFGVLISSVIKTFYEPFDEMKKDSKFWAIMFMLLGLASLVVIPARGYFFSVAGCKLIQRIRLICFEKVVNMEVGWFDEPENSSGAVGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFIASWQLALIILVLIPLIGLNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGIISGSGFGVSFFLLFSVYATSFYAGARLVKAGDTTFSDVFRVFFALTMAAIGISQSSSFAPDSSKAKSATASIFGMIDKKSKIDPSEESGTTLDSVKGEIELRHVSFKYPSRRDIQIFRDLNLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRQLQLKWLRQQMGLVSQEPILFNDTIRANIAYGKDGNATEAEIIAASELANAHRFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHTSAKTV* 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1610 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 67 355 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1610 1290 ProSitePatterns ABC transporters family signature. 1185 1199 IPR017871 GO:0005524
Mal1g1610 1290 Gene3D - 388 645 IPR027417 -
Mal1g1610 1290 Pfam ABC transporter 409 557 IPR003439 GO:0005524
Mal1g1610 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 390 626 IPR003439 GO:0005524
Mal1g1610 1290 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 21 1286 - -
Mal1g1610 1290 Pfam ABC transporter 1064 1213 IPR003439 GO:0005524
Mal1g1610 1290 PANTHER - 21 1286 - -
Mal1g1610 1290 SUPERFAMILY ABC transporter transmembrane region 704 1025 IPR036640 GO:0005524|GO:0016021
Mal1g1610 1290 CDD ABC_6TM_Pgp_ABCB1_D2_like 713 1028 - -
Mal1g1610 1290 CDD ABC_MTABC3_MDL1_MDL2 390 628 - -
Mal1g1610 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 628 IPR027417 -
Mal1g1610 1290 MobiDBLite consensus disorder prediction 9 29 - -
Mal1g1610 1290 MobiDBLite consensus disorder prediction 630 677 - -
Mal1g1610 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 724 1010 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1610 1290 MobiDBLite consensus disorder prediction 1 45 - -
Mal1g1610 1290 Gene3D ABC transporter type 1, transmembrane domain 113 1019 IPR036640 GO:0005524|GO:0016021
Mal1g1610 1290 MobiDBLite consensus disorder prediction 652 677 - -
Mal1g1610 1290 SUPERFAMILY ABC transporter transmembrane region 52 374 IPR036640 GO:0005524|GO:0016021
Mal1g1610 1290 ProSitePatterns ABC transporters family signature. 529 543 IPR017871 GO:0005524
Mal1g1610 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1045 1282 IPR003439 GO:0005524
Mal1g1610 1290 Pfam ABC transporter transmembrane region 723 995 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1610 1290 Pfam ABC transporter transmembrane region 66 341 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1610 1290 MobiDBLite consensus disorder prediction 630 651 - -
Mal1g1610 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1035 1283 IPR027417 -
Mal1g1610 1290 SMART AAA_5 417 603 IPR003593 -
Mal1g1610 1290 SMART AAA_5 1072 1265 IPR003593 -
Mal1g1610 1290 CDD ABC_MTABC3_MDL1_MDL2 1045 1283 - -
Mal1g1610 1290 CDD ABC_6TM_Pgp_ABCB1_D1_like 66 351 - -
Mal1g1610 1290 Gene3D - 1035 1289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1610 Mal-Chr1 21031482 21037601 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1610 39 1289 Calmodulin-binding Proteins AT2G36910 45.289 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1610 K05658 - gmx:100777909 2171.74