Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1608 ATGGCTGTGGAGAATGATGTTGATGAGATAGGGAATAACCACGATGAAGCAACAAAGTCAGAGAAGAACTCTGCAGAAACAAGTACAATTGGCAAAAGGGACATACAAAAAGAAAAACCCAAGACAGTTCCATTTCACAAGTTGTTCTCTTTTGCAGATTCCACTGACATTCTATTAATCATTGTTGGTACTATCGGTGCTATTGGAAACGGTTTGGGTTTACCTCTTATGACATTATTGTTCGGTCAAATGATTGATAGTTTTGGTAGTAACCAAAGTAACACAGACGATGTTGTAGAACAAGTGTCCAAGGTATCTCTAAAATATGTATATTTGGCCGTAGGATCTGGCGTGGCAGCATTTCTCCAGGTGAGTTGTTGGATGGTCACAGGGGAGAGACAAGCGGCAAGAATAAGAGGATTGTATTTGAAAACAATATTAAGACAAGATGTCACTTTCTTTGATAAAGAAACAAACACAGGAGAAGTTGTAGGGAGAATTTCTGGTGATACTGTTCTCATTCAAGATGCCATGGGTGAAAAGGTTGGGAAATTTCTGAATCTAATAACAACATTCCTTGGGGGTTTTGTGATAGCATTTGTCAGAGGGTGGCTTCTTACTGTTGTAATGATGTCAACTCTTCCAATTATTGTTGTGTCAGGTATTGCCATGGTTGTTATCATAGGCAGGATGGCTTTTAAATGTCAAACTGCTTATGCAAAAGCTGCACATGTTGTTGAACAGACAATTGGCTCAATAAGAACCGTTGCGTCTTTTACCGGTGAAAAGCAAGCAATATCTAGTTATAACAAATTTCTTGTAGATGCTTACATATCAGGAATTTATGAAGGTTCTCTAGCTGGAGTGGGGTTTGGCATATTTTTGTTTGTATTTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGTGCAAAGATGATAATGGAAAAAGGATATAATGGGGGCACTGTGATTAATGTGATAACCGCCGTGTTAACTTCTTCCATGTCTCTTGGCCAGGCATCACCAAGTATGAGTGCTTTTGCGGCGGGTCAGGCGGCGGCTTACAAAATGTTTGAAACAATTAAGAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATATTAGAGGATATTCAAGGTGAAATAGAGTTGAAGGAAGTTTATTTCAGTTATCCCGCAAGACCTGAGGAGCTGATATTCAATGGATTCTCTCTTCATATATCAAGCGGAACAACTGCAGCATTGGTTGGACAAAGTGGAAGTGGAAAGTCCACAGTTATTAGTTTGGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGAATTAACATGAAAGAATTTCAGCTCAGGTGGATCAGAGGGAAAATTGGTCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCCAGCATTAAGGATAACATTGCATATGGAAAGGAAGACGCAACAATTGAAGAGATAAGATCTGCATCTGAACTTGCAAATGCTGCTAAATTCATTGATAAACTACCACAGGGATTGAATACAATGGTTGGTGACCATGGAACTCAGCTGTCTGGTGGACAAAAGCAGCGCATTGCTATTGCAAGAGCAATCCTGAAGAATCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAAAGGGCAGTGCAAGATGCTCTAGATAGAATCATGGTCAACAGAACGACGATTGTTGTTGCACATCGCTTGAGCACAATTAGGAATGCTGACATGATTGCTGTAATCCATAGAGGGAAAGTGGTTGAGAAAGGAACACACTCGGAATTACTCATGGATACTGGAGGAGCTTATTCACAACTTATATGCTTACAAGAAGTAAATAAGGAATCAGAAGAAACTACAGACCATCACAGCAAAACTGAACTTTCTGCAGAATCCTTTAGACAGTCGAGTGAAAGGAAGTCACTTCAAAGATCTATTAGTACGGGATCATCTATAGGAAATAGTAGTCCCCATTCATTTTCAGTTTCGTTCGGTTTACCTACAGGAGTTAATGTTGCCGATCCTGAACTTGAAAATTTACCTACCAAAGAAAAAGGACAAGAGGTTTCGCTAAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATACCAGTTCTTCTTATTGGCTGCTTAGCTGCCATAGGAAACGGTGTCATATTTCCAATATTTGGTGTTTTGATGTCTAGTGTCATCAAAACATTTTATGAACCAATTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCAGTTATGCTTATGCTCCTTGGTCTTGCATCATTGCTGGTGATTCCAGCACAAGCTTACTTTTTCTCTGTGGCGGGATGCAAGTTAATCCAACGTATTAGACTATTATGTTTTGAGAAGGTGGTGAACATGGAGGTTGGTTGGTTCGATGAGCATGAAAACTCAAGCGGAGCAGTTGGTGCAAGGTTCTCAGTAGATGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCACTGGGACTGTTGGTTCAGAACTTGGCATCTGCATTGGCTGGTTTGATTATTGCTTTTGTTGCAAGCTGGCAGCTCGCATTGATTATTCTTGTCTTGATTCCACTGATTGGATTAAATGGATATGTTCATATGGAATTCTTAAAGGGGTTCAGCGCAGATGCAAAGATGATGTACGAGGAGGCCAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACTGTTGCTTCTTTTTGTGCTGAAGATAAGGTTACGGAACTATATAGGAAAAAATGTGAAGGTCCCATGAAAACAGGGATAAGGCAAGGGATGATCAGTGGAACAGGATTCGGTGTTTCATTTTTCTTATTGTTTAGTGGCTATGCAACTAGTTTCTACGCAGGAGCTAGACTTGTGAAAGCTGGGGATACGACATTTTCACATGTTTTTCGGGTTTTCCTTGCATTAACTATGGCAGCTATTGGTATTTCCAACTCAAGTTCCTTTGCTCCTGACTCCAGCAAAGCAAAATCAGCTACTGCTTCCATATTTGGAATAATTGATAAGAAGTCAAAGATAGATCCAAGTGATGAGTCTGATACCACTCTAGATATGGTTAAGGGTGAAATCGAGCTTAGCCATGTTAGCTTCAAGTATCCATCTAGGCCTAACATTCAGATTATCCGAGACCTCAGTGTGACCATCCATTCTGGCAAGACAATGGCACTTGTTGGTGAAAGTGGAAGTGGTAAATCCACTGTGATTGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGATGGGATAGAAATTCGTCAGTTACAGCTAAAGTGGTTAAGGCAGCAAATGGGTCTTGTAAGCCAAGAGCCAATATTATTCAATGACACTATCCGTGCCAACATTGCCTATGGAAAAGGTGGCAATGCAACTGAGGCAGAAATCATTGCTGCATCTGAATTGGCCAATGCTCATAGGTTCATTAGTGGCTTACAGCAGGGTTATGATACAATAGTGGGAGAGAGGGGAACTCAATTATCAGGTGGGCAGAAGCAAAGGGTAGCCATTGCACGAGCAATAATCAAAAGTCCAAAGATTTTGCTACTTGATGAGGCCACAAGTGCATTAGACGCAGAGTCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTCATGGTAAATAGGACCACTGTGGTTGTGGCACATCGTTTATCTACAATTAAAAATGCAGATGTTATTGCTGTTGTCAAGAATGGAGTTATTGTGGAAAAAGGAAGACATGAAACACTCATTAACGTTAAGGATGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTAAAACAGTATAG 3855 0.4065 MAVENDVDEIGNNHDEATKSEKNSAETSTIGKRDIQKEKPKTVPFHKLFSFADSTDILLIIVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQSNTDDVVEQVSKVSLKYVYLAVGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRISGDTVLIQDAMGEKVGKFLNLITTFLGGFVIAFVRGWLLTVVMMSTLPIIVVSGIAMVVIIGRMAFKCQTAYAKAAHVVEQTIGSIRTVASFTGEKQAISSYNKFLVDAYISGIYEGSLAGVGFGIFLFVFFCGYALAVWFGAKMIMEKGYNGGTVINVITAVLTSSMSLGQASPSMSAFAAGQAAAYKMFETIKRKPEIDAYDPNGKILEDIQGEIELKEVYFSYPARPEELIFNGFSLHISSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINMKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEDATIEEIRSASELANAAKFIDKLPQGLNTMVGDHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERAVQDALDRIMVNRTTIVVAHRLSTIRNADMIAVIHRGKVVEKGTHSELLMDTGGAYSQLICLQEVNKESEETTDHHSKTELSAESFRQSSERKSLQRSISTGSSIGNSSPHSFSVSFGLPTGVNVADPELENLPTKEKGQEVSLSRLASLNKPEIPVLLIGCLAAIGNGVIFPIFGVLMSSVIKTFYEPIDEMKKDSKFWAVMLMLLGLASLLVIPAQAYFFSVAGCKLIQRIRLLCFEKVVNMEVGWFDEHENSSGAVGARFSVDAASVRALVGDALGLLVQNLASALAGLIIAFVASWQLALIILVLIPLIGLNGYVHMEFLKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVTELYRKKCEGPMKTGIRQGMISGTGFGVSFFLLFSGYATSFYAGARLVKAGDTTFSHVFRVFLALTMAAIGISNSSSFAPDSSKAKSATASIFGIIDKKSKIDPSDESDTTLDMVKGEIELSHVSFKYPSRPNIQIIRDLSVTIHSGKTMALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRQLQLKWLRQQMGLVSQEPILFNDTIRANIAYGKGGNATEAEIIAASELANAHRFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHTSAKTV* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1608 1284 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524
Mal1g1608 1284 MobiDBLite consensus disorder prediction 8 36 - -
Mal1g1608 1284 Pfam ABC transporter 1058 1207 IPR003439 GO:0005524
Mal1g1608 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 718 1004 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1608 1284 CDD ABC_6TM_Pgp_ABCB1_D1_like 60 345 - -
Mal1g1608 1284 Gene3D ABC transporter type 1, transmembrane domain 107 1013 IPR036640 GO:0005524|GO:0016021
Mal1g1608 1284 MobiDBLite consensus disorder prediction 1 36 - -
Mal1g1608 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 349 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1608 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1276 IPR003439 GO:0005524
Mal1g1608 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1277 IPR027417 -
Mal1g1608 1284 SMART AAA_5 1066 1259 IPR003593 -
Mal1g1608 1284 SMART AAA_5 411 597 IPR003593 -
Mal1g1608 1284 CDD ABC_MTABC3_MDL1_MDL2 384 622 - -
Mal1g1608 1284 SUPERFAMILY ABC transporter transmembrane region 40 368 IPR036640 GO:0005524|GO:0016021
Mal1g1608 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 622 IPR027417 -
Mal1g1608 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 620 IPR003439 GO:0005524
Mal1g1608 1284 Pfam ABC transporter 403 551 IPR003439 GO:0005524
Mal1g1608 1284 CDD ABC_MTABC3_MDL1_MDL2 1039 1277 - -
Mal1g1608 1284 Gene3D - 382 639 IPR027417 -
Mal1g1608 1284 MobiDBLite consensus disorder prediction 651 669 - -
Mal1g1608 1284 Gene3D - 1030 1283 IPR027417 -
Mal1g1608 1284 MobiDBLite consensus disorder prediction 626 650 - -
Mal1g1608 1284 ProSitePatterns ABC transporters family signature. 1179 1193 IPR017871 GO:0005524
Mal1g1608 1284 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 12 1280 - -
Mal1g1608 1284 Pfam ABC transporter transmembrane region 717 989 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1608 1284 Pfam ABC transporter transmembrane region 60 335 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1608 1284 SUPERFAMILY ABC transporter transmembrane region 705 1023 IPR036640 GO:0005524|GO:0016021
Mal1g1608 1284 CDD ABC_6TM_Pgp_ABCB1_D2_like 707 1022 - -
Mal1g1608 1284 MobiDBLite consensus disorder prediction 626 669 - -
Mal1g1608 1284 PANTHER - 12 1280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1608 Mal-Chr1 21016007 21022035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1608 36 1283 Calmodulin-binding Proteins AT2G36910 44.754 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1608 K05658 - gmx:100777909 2097.4