Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1607 ATGGGTGTGGAGATTGAGAATGATGTTGTTGATGAGAAAGGGAATAACCATGATGATGAAGCAACCACAGCAGGGAAGAATTCTGCAGAAACAGATACAAACGGCGAAAAGGACAAACAAAAAGAAAAAGTCGAGACAGTTCCATTTCACAAGTTGTTCTCTTTTGCAGATTCCACTGACATTCTATTAATGGTTGTTGGAACTATCGGTGCCATTGGAAACGGTTTGGGTTTACCTCTTATGACATTATTGTTCGGTCAAATGATTAATAGTTTCGGTAGTAACCAAAGTAATACCACAGATGTTGTGGAACAAGTCTCCAAGATATCTCTGAATTATGTATATTTGGCCGTAGGATCTGGGGTGGCAGCATTTCTCCAGGTGAGTTGTTGGATGGTTACTGGAGAAAGACAAGCCGCGAGAATAAGAGGATTGTATTTGAAAACAATATTAAGACAAGATGTCACTTTCTTTGATAAAGAAACAAACACAGGAGAAGTTGTAGGGAGAATGTCAGGTGATATTGTTCTCATTCAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGAATCTAATAGCAACATTCATTGGGGGTTTTGCGATATCATTTTTCAAAGGGTGGCTTCTTACTGTTGTAATGTTGTCAACTATTCCACTTCTTGTTGTGTCAGGTGGTGGCATGGCTATTATCATAGGCAGGATGGCTTCTAAAAGTCAAACTGCTTATGCAAAAGCTGCACATGTTGTTGAACAGACAATTGGCTCAATAAGAACCGTTGCATCCTTTACTGGCGAAAAGCAAGCAGTATCTAGTTATAACAAATTTCTTGTAGATGCTTACATATCAGGAATTTATGAAGGTTCTATGGTTGGAGTGGGCGTAGGCACGATTATGTTTGTTATTTTCTGTGGTTATGCTTTGGCCGTATGGTTTGGTGCAAAGATGATCATGGAAAAAGGATATAATGGGGGCACTGTGATTAATGTGCTTTTCGCCGTATTAAGTGCTTCCATGTCTCTTGACCAGGCATCACCTAGCATGCGTGCTTTTGCTGCGGGTCAGGCAGCGGCTTACAAAATGTTTGAGACAATTAAGAGGAAGCCAGAGATAGATGCATATGATCCCAATGGAAAAATATTAGAGGATATTCAAGGTGAAATAGAGTTGAAGGAAGTTTATTTCAGTTATCCTGCTAGACCTGAAGAGCTGATATTCAATGGGTTCTCTCTTCATATACCGAGTGGTACAACTGCAGCATTGGTTGGACAAAGTGGAAGTGGAAAGTCCACAGTTATCAGTTTAGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGAATTAACATGAAAGAATTTCAGCTCAGGTGGATCAGAGGGAAAATTGGTCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATGCAGCATTAAGGACAACATTGCATATGGAAAACAAGGAGCAACAATTGAAGAGATAAGATCTGCATCTGAACGTGCAAATGCTGCCAAATTCATTCATCAACTTCCACAGGGATTGGACACAATGGTTGGTGACCATGGAACTCAGCTGTCTGGTGGACAGAAGCAGCGCATTGCGATCGCAAGAGCAATCCTAAAGAATCCAACAATTCTACTACTAGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAAAGGGTAGTGCAAGAGGCTCTCGATAGGATCATGGTCAACAGAACTACGGTTGTTGTTGCACATCGCTTGAGCACCGTGAGGAATGCTAACATGATTGCCGTAATCCATAGAGGGAAAATGGTTGAGAAAGGAACACACTCAAAACTACTCAAGGATCCTGAAGGAGCTTATTCACAACTTATACGCTTACAAGAAGTAAATAAGGAATCAGAAGAAACTACAGACCATAACAGCAAGAGCGAACTTTCTGCAGAATCCTTTAGACAGTCGAGTCAAAGGAATTCGCTTCAAAGATCTATTAGTAGGGTATCCTCTATAGGGTATAGTAGTCGCCATTCATTTTCAGTTTCGTTTGGTTTACAAACAGGTGTTAACGTCACCAATCCTGAACTTGAAAATTTACCGACTAAAGAAAAAGTAGAAGAAGTTCCACTAAGCCGCCTTGCATCCCTCAACAAGCCAGAGATTCCAGCTCTTCTTTTTGGATGTTTAGCCGCCATAGGTAATGGGGTCATACTTCCAATATTTGGCATTCTGATTTCTAGTGTCATCAAAACATTTTATGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCAGTAATGCTTATGCTCCTTGGTCTTGCATCATTACTGGTGATTCCAGCACAGGCTTACTTTTTCTCCGTGGCTGGATGCAAGTTAATCCAACGTATCAGACTAACATGTTTTGAGAAGGTGGTGAATATGGAGGTTGGTTGGTTCGATGAGCATGAAAACTCAAGCGGCGCAGTGGGTGCAAGGTTCTCAGCAGACGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCACTTGGACTGTTGGTTCAGAATTTTTCATCTGCATTGGCTGGTTTGATTATTGCTTTTATTGCAAGCTGGCAGCTTGCATTGATTGTTCTTGTCTTGATTCCACTGATTGGATTAAATGGATATGTTCAAATGGAATTCTTGAAGGGATTCAGCGCAGATGCAAAGATGATGTACGAGGAGGCCAGCCAAGTTGCTAATGATGCAGTTGGAAGCATACAAACTGTTGCTTCTTTCTGTGCTGAAGATAAGGTTATGGAACTATATAGGAAAAAATGTGAAGGTCCCATGAAAACAGGGATAAGGCAAGGGATAATCAGTGGGACAGGATTCGGTGTTTCATTTTTCTTATTGTTTAGTGTCTATGCAACCTGTTTCTACGCAGGAGCTAGACTTGTGAAAGCTGGGGATACAACATTTTCACATGTTTTCCGGGTTTTCTTTGCATTAACTATGGCAGCTATTGGTATTTCCCAATCAAGTTCCTTTGCTCCTGACTCCAGCAAAGCAAAGTCAGCTACTGCTTCCATATTTGGAATAATTGATAAGAAGTCAAAGATAGATCCAAGTGATGAGTCTGGTACCACTCTAGATAGCGTTAAGGGTGAAATTGAACTTCGCCATGTTAGCTTCAAGTATCCATCTAGGCCTAATATTCAGATTTTCCGAGACCTCAGCTTGACCATCCATTCTGGCAAGACTATGGCACTTGTTGGTGAAAGTGGAAGTGGGAAGTCCACGGTGATTGCTTTGTTGCAAAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGATGGGATAGAAATTCGTGAGTTACAGCTCAAGTGGTTAAGGCAACAGATGGGTCTTGTAAGCCAAGAGCCAGTATTATTCAACGACACTATCCGTGCTAATATTGCCTATGGAAAAGGTGGCAATGCAACTGAGGCAGAAATCATATCTGCAGCTGAATTGGCCAATGCCCATGGGTTCATTAGTGGCTTACAACAGGGTTATGATACAATAGTGGGAGAGAGGGGAACTCAATTATCAGGTGGGCAGAAACAAAGGGTAGCCATTGCACGTGCAATAATCAAAAGTCCAAAGATTTTGTTACTTGATGAGGCCACAAGTGCATTAGACGCTGAGTCGGAGAGAGTTGTTCAAGATGCATTAGACAAAGTCATGGTAAATAGGACCACTGTGGTTGTGGCACATCGTTTATCTACAATTAAAAATGCAGATGTTATTGCTGTTGTCAAGAATGGAGTTATTGTGGAAAAAGGAAGACATGAAACACTTATTAACGTTAAAGATGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTAAAACAGTATAG 3867 0.4119 MGVEIENDVVDEKGNNHDDEATTAGKNSAETDTNGEKDKQKEKVETVPFHKLFSFADSTDILLMVVGTIGAIGNGLGLPLMTLLFGQMINSFGSNQSNTTDVVEQVSKISLNYVYLAVGSGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDIVLIQDAMGEKVGKFLNLIATFIGGFAISFFKGWLLTVVMLSTIPLLVVSGGGMAIIIGRMASKSQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYNKFLVDAYISGIYEGSMVGVGVGTIMFVIFCGYALAVWFGAKMIMEKGYNGGTVINVLFAVLSASMSLDQASPSMRAFAAGQAAAYKMFETIKRKPEIDAYDPNGKILEDIQGEIELKEVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINMKEFQLRWIRGKIGLVSQEPVLFACSIKDNIAYGKQGATIEEIRSASERANAAKFIHQLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPTILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNANMIAVIHRGKMVEKGTHSKLLKDPEGAYSQLIRLQEVNKESEETTDHNSKSELSAESFRQSSQRNSLQRSISRVSSIGYSSRHSFSVSFGLQTGVNVTNPELENLPTKEKVEEVPLSRLASLNKPEIPALLFGCLAAIGNGVILPIFGILISSVIKTFYEPFDEMKKDSKFWAVMLMLLGLASLLVIPAQAYFFSVAGCKLIQRIRLTCFEKVVNMEVGWFDEHENSSGAVGARFSADAASVRALVGDALGLLVQNFSSALAGLIIAFIASWQLALIVLVLIPLIGLNGYVQMEFLKGFSADAKMMYEEASQVANDAVGSIQTVASFCAEDKVMELYRKKCEGPMKTGIRQGIISGTGFGVSFFLLFSVYATCFYAGARLVKAGDTTFSHVFRVFFALTMAAIGISQSSSFAPDSSKAKSATASIFGIIDKKSKIDPSDESGTTLDSVKGEIELRHVSFKYPSRPNIQIFRDLSLTIHSGKTMALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRELQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIISAAELANAHGFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINVKDGFYASLVQLHTSAKTV* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1607 1288 PANTHER - 9 1284 - -
Mal1g1607 1288 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 9 1284 - -
Mal1g1607 1288 MobiDBLite consensus disorder prediction 1 42 - -
Mal1g1607 1288 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 722 1008 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1607 1288 CDD ABC_MTABC3_MDL1_MDL2 1043 1281 - -
Mal1g1607 1288 Pfam ABC transporter transmembrane region 721 993 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1607 1288 Pfam ABC transporter transmembrane region 65 339 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1607 1288 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 65 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g1607 1288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 626 IPR027417 -
Mal1g1607 1288 SUPERFAMILY ABC transporter transmembrane region 709 1027 IPR036640 GO:0005524|GO:0016021
Mal1g1607 1288 Pfam ABC transporter 1062 1211 IPR003439 GO:0005524
Mal1g1607 1288 CDD ABC_6TM_Pgp_ABCB1_D2_like 711 1026 - -
Mal1g1607 1288 MobiDBLite consensus disorder prediction 629 644 - -
Mal1g1607 1288 ProSitePatterns ABC transporters family signature. 1183 1197 IPR017871 GO:0005524
Mal1g1607 1288 Gene3D ABC transporter type 1, transmembrane domain 112 1017 IPR036640 GO:0005524|GO:0016021
Mal1g1607 1288 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 388 624 IPR003439 GO:0005524
Mal1g1607 1288 Gene3D - 386 643 IPR027417 -
Mal1g1607 1288 SUPERFAMILY ABC transporter transmembrane region 45 372 IPR036640 GO:0005524|GO:0016021
Mal1g1607 1288 SMART AAA_5 415 607 IPR003593 -
Mal1g1607 1288 SMART AAA_5 1070 1263 IPR003593 -
Mal1g1607 1288 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1043 1280 IPR003439 GO:0005524
Mal1g1607 1288 Pfam ABC transporter 407 555 IPR003439 GO:0005524
Mal1g1607 1288 Gene3D - 1033 1287 IPR027417 -
Mal1g1607 1288 ProSitePatterns ABC transporters family signature. 527 541 IPR017871 GO:0005524
Mal1g1607 1288 CDD ABC_6TM_Pgp_ABCB1_D1_like 64 348 - -
Mal1g1607 1288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1033 1281 IPR027417 -
Mal1g1607 1288 MobiDBLite consensus disorder prediction 629 652 - -
Mal1g1607 1288 CDD ABC_MTABC3_MDL1_MDL2 388 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1607 Mal-Chr1 20964294 20970119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1607 37 1287 Calmodulin-binding Proteins AT2G36910 45.059 0.0 1074