Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1588 ATGGCATCTTCGTTCTCAACACAGTTGGTGCAGAGTCAGAACCTACTTTCTGGTTTTCATGCTGTCCAGGGGAAGCCACAGGTAGTTTGTAGCAGTACCAGATCACAGCTTGGATGCAGTAAATTGTCATCAGGATATCATTACGCATCGAGGCTTTCTGTGTCACAACCATCTAAAGCGAGATCAATCACTTCTCGGAGAATTACATGTACTAGTAGTGCTAATGTTGCAGATCTGCAAGCCAAAGTAACAAACAAGGTTTTCTTTGATATAGAAATTGGGGGTGAATCTGCTGGAAGGATTGTTATTGGCCTATTTGGAGATGTTGTTCCCAAAACAGTTGACAATTTCCGAGCTTTGTGCACAGGAGAGAAAGGATATGGTTTCAAAGATTGCTACTTCCATCGCATAATCAAAGATTTCATGATTCAGGGAGGGGACTTCACAGAAGGAGATGGAACTGGTGGAATCAGTATCTATGGTGCTAAATTTGAAGACGAGAATTTTGCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAACGGCAGTCAATTTTTTATTTGCACTGTACCGACTCCATGGTTGGACAATCGCCATGTTGTATTTGGACATGTCATTGATGGAATGGATGTTGTGAAGACACTTGAATCACAGGAGACAAGCAAGTTCGACAATAGTCCCAAGAAATCATGCAAAATCGCAAAATCTGGAGAACTTCCTCTAGATGGTTGA 756 0.4233 MASSFSTQLVQSQNLLSGFHAVQGKPQVVCSSTRSQLGCSKLSSGYHYASRLSVSQPSKARSITSRRITCTSSANVADLQAKVTNKVFFDIEIGGESAGRIVIGLFGDVVPKTVDNFRALCTGEKGYGFKDCYFHRIIKDFMIQGGDFTEGDGTGGISIYGAKFEDENFALKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIDGMDVVKTLESQETSKFDNSPKKSCKIAKSGELPLDG* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1588 251 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 246 IPR002130 GO:0000413|GO:0003755
Mal1g1588 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 177 192 IPR002130 GO:0000413|GO:0003755
Mal1g1588 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 192 204 IPR002130 GO:0000413|GO:0003755
Mal1g1588 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 120 IPR002130 GO:0000413|GO:0003755
Mal1g1588 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Mal1g1588 251 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 220 IPR002130 GO:0000413|GO:0003755
Mal1g1588 251 CDD cyclophilin_ABH_like 86 245 - -
Mal1g1588 251 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 38 250 - -
Mal1g1588 251 MobiDBLite consensus disorder prediction 229 251 - -
Mal1g1588 251 Gene3D - 74 250 IPR029000 -
Mal1g1588 251 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 38 250 - -
Mal1g1588 251 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 129 146 IPR020892 GO:0003755|GO:0006457
Mal1g1588 251 SUPERFAMILY Cyclophilin-like 79 247 IPR029000 -
Mal1g1588 251 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 89 244 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1588 Mal-Chr1 20713658 20716425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1588 99 244 U-box Gene Family AT5G67530 44.218 1.05e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1588 K03768 - gmx:100526955 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1588 1 20713658 20716425 Mal1g1588 1 20713658 20716425 ECH