Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1580 ATGTGGATTGATTGTGATGCAAGTCAAGTTTCCCAATGGTGCCACAGGAGAACTTCCATAACAATTACTGCCACTAATTTCTGTCCCCCAAATTTTGTTCTCCCTAGTAACAATGGTGGTTGGTCTAATCATCCTAGACCACATTTTGACATGTCCCAACCTGCTTTTCAAATGATCGCCAAATATAAAGCTGGGATTGTTCCAATCCTTTACAGAAAAGTTGGGTGCAAAAGAAATGGAGACACTATAACAGGACAACTTGATGATTTCTTTGATGAAATAGTTGAAGGAAGGAAGAAGCTTTTGGACATGTGTAGCCATAGGTCTTTCTCTTAA 336 0.3929 MWIDCDASQVSQWCHRRTSITITATNFCPPNFVLPSNNGGWSNHPRPHFDMSQPAFQMIAKYKAGIVPILYRKVGCKRNGDTITGQLDDFFDEIVEGRKKLLDMCSHRSFS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1580 111 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 81 IPR007112 -
Mal1g1580 111 PRINTS Expansin signature 39 56 IPR002963 GO:0009664
Mal1g1580 111 PRINTS Expansin signature 20 30 IPR002963 GO:0009664
Mal1g1580 111 PRINTS Expansin signature 7 18 IPR002963 GO:0009664
Mal1g1580 111 PRINTS Expansin signature 56 69 IPR002963 GO:0009664
Mal1g1580 111 SMART dpbb_1 1 71 IPR007112 -
Mal1g1580 111 Pfam Lytic transglycolase 10 71 IPR009009 -
Mal1g1580 111 Gene3D - 1 77 IPR036908 -
Mal1g1580 111 SUPERFAMILY Barwin-like endoglucanases 8 83 IPR036908 -
Mal1g1580 111 PANTHER EXPANSIN 3 92 - -
Mal1g1580 111 PANTHER EXPANSIN-A15 3 92 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1580 Mal-Chr1 20622739 20623976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1580 3 95 Expansin Gene Family AT4G01630 64.583 3.54e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1580 - - gmx:100813434 147.902