Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1560 ATGGTGAACCTTTTCTGGGTTTGCATTGTAATAACACTTGTTTTCACCAACTGGGTTGATGCCTATTATCACATCAATGAAACTGAACTATCTATCTTAGAAGCTCATGAAGCTTCTTCTTTTTCTTCACTTTTGAGTCAGCCTCACATGGTTGGAATCACCCTTATTCAATCTGCTGCTGCTAAAGGAGCTGTCTGCTTGGATGGAACATTGCCTGCTTATCATTTTGATCGTGGATATGGATCGGGTGCAAACAGCTGGCTCGTCAATTTAGAGGGAGGTGGATGGTGTAATAACCGTAGAACATGCGTCTATCGCAAGACAACACGTCGTGGATCATCAAAATTCATGGAAAAAGCTTTACCTTTTACTGGAATATTAAGCAATAATGCTCAGGAGAATCCAGATTTTTTTAACTGGAACAGAGTGAAAATTCGTTACTGTGATGGTGCTTCTTTTACTGGGGATAGTGAAGATAAGGCTGCACAATTGCAATTCAGAGGACAACGCATTTGGTTGGCCGCAATGGAGGATTTGATGTCAAAAGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCTGGTGGTCTTGCTACTATTTTACACTGCGATGAATTTCGAGGTCATTTCTCAAGGAATACCAAAGTGAAGTGTCTTAGTGATGCTGGTTTATTTCTTGATGCTGTTGATGTAGCTGGTGGGCATACCCTCAGGAAATTTTTCAATGGCGTTGTGACCCTACAGGGAGCACAGAAGAATCTTCCACGCGTTTGTACTAATCATCTTGATCCCACTTCGTGCTTCTTTCCCGAGAACTTGATTGCCAGTGTCAGAACCCCTCTATTCATTCTTAATACTGCCTATGACTCATGGCAGATCCAGTCAAGCTTAGCTCCTCCATCGGTTGATCCTCACGGCTATTGGCGCGGATGCAGATTAAACCATGCTAAATGTACCGGTTCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGATGAATGTTGTTAAAGGCTTCTCAAGATCAAATCAAAATGGATTGTTCTTAAATTCATGCTTTGCTCACTGCCAATCTGAGAGGCAAGACACATGGTTTGCTGACAACTCTCCTGTCATTGGGAACAAGGCAATTGCTCTCGCAGTTGGAGACTGGTATTTTGACCGAGCCGTTGTTAAGGACCTTGATTGTCCTTACCCTTGTGATAATACATGCCACCATCTGGTTTTCAGATGA 1245 0.4273 MVNLFWVCIVITLVFTNWVDAYYHINETELSILEAHEASSFSSLLSQPHMVGITLIQSAAAKGAVCLDGTLPAYHFDRGYGSGANSWLVNLEGGGWCNNRRTCVYRKTTRRGSSKFMEKALPFTGILSNNAQENPDFFNWNRVKIRYCDGASFTGDSEDKAAQLQFRGQRIWLAAMEDLMSKGMRFAKQALLSGCSAGGLATILHCDEFRGHFSRNTKVKCLSDAGLFLDAVDVAGGHTLRKFFNGVVTLQGAQKNLPRVCTNHLDPTSCFFPENLIASVRTPLFILNTAYDSWQIQSSLAPPSVDPHGYWRGCRLNHAKCTGSQIQFLQGFRNHMMNVVKGFSRSNQNGLFLNSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVVKDLDCPYPCDNTCHHLVFR* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1560 414 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
Mal1g1560 414 PANTHER PECTIN ACETYLESTERASE 4 413 - -
Mal1g1560 414 PANTHER NOTUM-RELATED 4 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1560 Mal-Chr1 20398082 20401738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1560 50 414 Carbohydrate Esterase AT1G57590 73.425 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1560 K19882 - gmx:100788448 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1560 1 20398082 20401738 Mal3g4798 3 127965376 127969306 ECH
Mal1g1591 1 20734239 20737780 Mal1g1560 1 20398082 20401738 ECH
Mal5g5036 5 123989697 123994431 Mal1g1560 1 20398082 20401738 ECH
Mal1g1560 1 20398082 20401738 Mal1g1560 1 20398082 20401738 ECH
Mal3g4798 3 127965376 127969306 Mal1g1560 1 20398082 20401738 PCT