Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1536 ATGCCAATAAGAAAGTATTATTGTGAATATTGCGATAAGCAATTTCAAGATACACCCTTAGATCGGAAACGCCACTCTGTCGGTATTCAACATCAACAAGCCAAAGCTCGTTGGTACGATTCTTTCGAATCCGAACAGCAGAACCCCATCCCACAATCATCTAATCAATCATTCTGCTTCCACTTTGTCAACACGGGATTTTGTCGTTACGGCGATTCTTGCAAATATTTTCATCCCAATACACAGCAGCAGCAGCAACCAATAACAACTACGCCAGGGAATGTAGTAGGGGATACCATGGGAGTGTCATTTGGCAATTTGCCTCCGTCACTGCAGCCTCCGCCTGAGGGTGGATACCCCAACCTCCCCTTTCTCGATTGGGGATAG 387 0.4574 MPIRKYYCEYCDKQFQDTPLDRKRHSVGIQHQQAKARWYDSFESEQQNPIPQSSNQSFCFHFVNTGFCRYGDSCKYFHPNTQQQQQPITTTPGNVVGDTMGVSFGNLPPSLQPPPEGGYPNLPFLDWG* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1536 128 SUPERFAMILY beta-beta-alpha zinc fingers 4 52 IPR036236 -
Mal1g1536 128 Pfam U1 zinc finger 4 39 IPR013085 GO:0008270
Mal1g1536 128 SMART c3hfinal6 53 80 IPR000571 GO:0046872
Mal1g1536 128 PANTHER NUCLEASE-RELATED 1 128 - -
Mal1g1536 128 Gene3D Classic Zinc Finger 3 58 - -
Mal1g1536 128 MobiDBLite consensus disorder prediction 81 97 - -
Mal1g1536 128 SUPERFAMILY CCCH zinc finger 55 82 IPR036855 GO:0046872
Mal1g1536 128 ProSiteProfiles Zinc finger C3H1-type profile. 53 81 IPR000571 GO:0046872
Mal1g1536 128 MobiDBLite consensus disorder prediction 81 128 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1536 50 87 C3H Transcription Factor Family AT1G04990 50.000 1.13e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal1g1536 zf-U1 7.5e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1536 K13152 - gmx:100527203 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1536 1 19983999 19984565 Mal1g1536 1 19983999 19984565 ECH