Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1534 ATGGGTGTTAATGTGAATTCAGATTCAAAGCCAACAACGGTTGAGATCAAAGAACTGAAATTCACATATCCTGGAATCGACGGTCATCCTCCACCGGGTTCCAAACCTCTCATTGAACATTTCTCTCTCAATCTCTTCGCCGGTGATCGGTGTCTTCTCGTCGGATCCAACGGCGCCGGAAAGACTACAATTCTGAAGATATTAGGAGGGAAACACATGGTGGAGCCTGAAATGGTTCGTGTTCTTGGAAGATCTGCTTTTCATGATACTACTTTAACTTCTTCTGGTGATTTATGTTATCTTGGTGGTGAGTGGAGGAGAGATGTTGCTTTTGCTGGTTTTGAAGTTCCAATACAGATGGACATTTCTGCTGAGAAAATGATATTTGGTGTGGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTAATTAAGGTATTAGATATCAATCTTTCATGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTGGATGAGATAACAGTTGACCTTGATGTTCTAGCGAGAGCCGACCTTCTGAAGTTTCTAAAAAAGGAATGTGATGAAAGGGGTGCTACTATTATATATGCAACACATATATTTGACGGTCTTGAGGATTGGCCAACAAATATTGTTTATGTAGCTCATGGAAGGCTGGAACTGGCAATGCCCATAGCGAAAGTCAAAGAAACTAGCAAACTGTCACTAATGAGAACAGTAGAAGTTTGGCTACGGAAGGAGCGAGATGAAGATAGAAGACAAAGGAAAGAAAGGAAGGCTGCTGGCCTTCCTGAATTTGATAAGCAAGTTGATGGAAGCCGTGTAGTTGGGGGGGATCCTGCACGAGCTTCAGTTCGAGTTACTAATAATGGCTGGGCCGCAGGCCGGTTACATTCCACCGTAGCTGGTGAAGAAAACTTCCTCCTAAGCTCAAACCGAGTATTGAGGGGGTAA 1002 0.4311 MGVNVNSDSKPTTVEIKELKFTYPGIDGHPPPGSKPLIEHFSLNLFAGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTTLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLKKECDERGATIIYATHIFDGLEDWPTNIVYVAHGRLELAMPIAKVKETSKLSLMRTVEVWLRKERDEDRRQRKERKAAGLPEFDKQVDGSRVVGGDPARASVRVTNNGWAAGRLHSTVAGEENFLLSSNRVLRG* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1534 333 SMART AAA_5 47 234 IPR003593 -
Mal1g1534 333 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 12 332 - -
Mal1g1534 333 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 12 332 - -
Mal1g1534 333 Gene3D - 9 287 IPR027417 -
Mal1g1534 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 248 IPR027417 -
Mal1g1534 333 Pfam ABC transporter 40 184 IPR003439 GO:0005524
Mal1g1534 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 257 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1534 Mal-Chr1 19970804 19973663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1534 14 211 Calmodulin-binding Proteins AT2G36910 24.651 1.16e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1534 K12608 - gmx:100782386 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1534 1 19970804 19973663 Mal1g1534 1 19970804 19973663 ECH