Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1521 ATGGATTCATTCGAACCAAACATAGATTCAACTCATTCAAACACATCACAAGAATCCAATCACAAGAAACGCCGCAAAATCGAAAACCTCACCACCGATCAAAACTCCATCAATCTCATGCCATGGAGATCCGAATCAGACCAAAACACTTACTCCAAAAAACTAATCGAAGCACTCCGCCGTATAAACTCCCCGGAGACAACCAAACCTAGAGCCGCCGGTCAAGTCCGTGAAACCGCCGATCGAGTCCTCGCCGCAACCGCAAAGGGAAGAACACGCTGGAGCCGGGCGATTCTCAACCGATGGAAGAAACTCCGAAGACATCACAAGAAAGTGAAGAAAGCTGCAAACAACGGATTGAAGAAATCTTCCAACAACAACAACGGATTGAAGAGAGAGAAGATTCAACGGTTACCGGCTGTGCAGAAGAAAACGCGCGTTTTAGGCCGGTTGGTTCCCGGTTGCCGGAAAGTTCCGTTACCGAATCTTCTAGAAGAAGCTACTGATTATATCTCTGCTTTGGAGATGCAAGTGCGTGCTATGACAGCTCTCGCTGAGCTTCTCGCCGGTGGAACATCGGCGGGAATCGCCGGTCAGGTGTTGAGTTGA 609 0.4877 MDSFEPNIDSTHSNTSQESNHKKRRKIENLTTDQNSINLMPWRSESDQNTYSKKLIEALRRINSPETTKPRAAGQVRETADRVLAATAKGRTRWSRAILNRWKKLRRHHKKVKKAANNGLKKSSNNNNGLKREKIQRLPAVQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALAELLAGGTSAGIAGQVLS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1521 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 201 IPR044660 GO:0006355
Mal1g1521 202 MobiDBLite consensus disorder prediction 112 138 - -
Mal1g1521 202 MobiDBLite consensus disorder prediction 1 15 - -
Mal1g1521 202 CDD bHLH_AtIBH1_like 130 185 IPR044549 GO:0006355
Mal1g1521 202 MobiDBLite consensus disorder prediction 118 132 - -
Mal1g1521 202 MobiDBLite consensus disorder prediction 1 32 - -
Mal1g1521 202 PANTHER TRANSCRIPTION FACTOR BHLH150 15 201 - -
Mal1g1521 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 190 IPR036638 GO:0046983
Mal1g1521 202 MobiDBLite consensus disorder prediction 16 30 - -
Mal1g1521 202 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1521 Mal-Chr1 19754113 19754721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1521 1 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.388 4.48e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1521 - - gmx:100783462 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1521 1 19754113 19754721 Mal1g1521 1 19754113 19754721 ECH