Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1514 ATGGAACTAGAACACAACCAATCGGATCTAATCGGGTTGGATATGACAGATCGGATTATCAAGAACCAGATCGCAACTCACCCTCTTTATCCAAATCTACTATCTGCTTTTATAGAATGCCAAAAGGTTGGGGCACCAACAGAACTTGCGTCTCTTCTTGAAGAAATAGGGCGTGAAAGCCACCAAAATAATTCTTTCCGTGAGATAGGAGATGATCCTGACCTTGACCACTTCATGGAATCATACTGTCAAGTTCTTCATAGATACAAAGAGGAATTGTCAAAGCCCTTCAATGAAGCAACATTGTTTTTGTGTAATATTGAATCACAACTAAGCCAACTTTGCAAGGGGACACAAACAGTGTCATCAGATAACAACCGTTCAGATCATGAGGCAGCAGGGACATCAGAGGATGAAATGAGTTGTGAAAAGGTTGAAGTAGTAGAAGGTGGTTATCATGAACTTTGTGGCACATCATGTGCAGGTGATAAAGAGCTTAAAGAAATGCTCCTTCGTAAGTATGGGGGTTATCTTAGCAACTTGAGAAAGGAATTTCTAAAGAAAAGGAAAAAAGGTAAACTACCAAAGGATGCAAGAAAAGCATTGATGGATTGGTGGAATGTTCACTATAGGTGGCCTTATCCCACGGAGGAGGAGAAAATGCAGCTATCAGATATGACTGGACTTGATATAAAGCAGATAAATAATTGGTTCATCAATCAGAGAAAAAGACACTGGAAACCATCTGAAGATATGAGATTTGCCATTATGGAAGGTGTAAGTAGCACCGGCATAGCAGGACCTCTGTAA 810 0.4025 MELEHNQSDLIGLDMTDRIIKNQIATHPLYPNLLSAFIECQKVGAPTELASLLEEIGRESHQNNSFREIGDDPDLDHFMESYCQVLHRYKEELSKPFNEATLFLCNIESQLSQLCKGTQTVSSDNNRSDHEAAGTSEDEMSCEKVEVVEGGYHELCGTSCAGDKELKEMLLRKYGGYLSNLRKEFLKKRKKGKLPKDARKALMDWWNVHYRWPYPTEEEKMQLSDMTGLDIKQINNWFINQRKRHWKPSEDMRFAIMEGVSSTGIAGPL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1514 269 MobiDBLite consensus disorder prediction 118 140 - -
Mal1g1514 269 Pfam Homeobox KN domain 205 244 IPR008422 GO:0003677|GO:0006355
Mal1g1514 269 SMART KNOX1_2 18 62 IPR005540 GO:0003677|GO:0005634
Mal1g1514 269 SMART ELK_2 165 186 IPR005539 GO:0003677
Mal1g1514 269 Gene3D - 183 257 - -
Mal1g1514 269 CDD homeodomain 197 249 IPR001356 GO:0003677
Mal1g1514 269 Pfam KNOX1 domain 20 61 IPR005540 GO:0003677|GO:0005634
Mal1g1514 269 ProSiteProfiles 'Homeobox' domain profile. 185 248 IPR001356 GO:0003677
Mal1g1514 269 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 14 259 - -
Mal1g1514 269 Pfam ELK domain 165 186 IPR005539 GO:0003677
Mal1g1514 269 ProSitePatterns 'Homeobox' domain signature. 223 246 IPR017970 GO:0000981|GO:0006355
Mal1g1514 269 SUPERFAMILY Homeodomain-like 187 257 IPR009057 -
Mal1g1514 269 SMART HOX_1 187 252 IPR001356 GO:0003677
Mal1g1514 269 Pfam KNOX2 domain 69 115 IPR005541 GO:0003677|GO:0005634
Mal1g1514 269 ProSiteProfiles ELK domain profile. 165 185 IPR005539 GO:0003677
Mal1g1514 269 SMART KNOX2_2 65 116 IPR005541 GO:0003677|GO:0005634
Mal1g1514 269 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 10 14 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1514 Mal-Chr1 19628919 19634601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1514 19 263 Homeobox Transcription Factor Family AT1G23380 52.734 7.41e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mal1g1514 KNOX2 2.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1514 - - cam:101509394 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1514 1 19628919 19634601 Mal1g1514 1 19628919 19634601 ECH