Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1496 ATGGTAATGGAGAAAAGAAGTTACAAGGGAAGCTTCCTTAGCTTCTTTGATAGGAATGGAAAATCTCAAAAGAAACTCTTTTGCCACAATTCTAAGTTACCAGATGTTTCAAAGCATAGAAGAAAGGAAAACATTGAAATCATGCCAATGTCACAGATAAAGATGGATGAGAATGGAGAAAATCCTAGTAGTATTGCAAGTAGTGATTTTAACTATGCCTTATTATCAATTAGTAGTGATGATGATGAAGAAGGGTGTGGGACTAATAAATCTCCAGGACTAGTAGCCAGACTCATGGGTTTGGATTCATTAACTCAGTGTTACTCCAACTCTCATGAGAAAAGGGTTCATTCAATGGCTAAGCCAATTTCTTCAATCAAAAGCCATGGTTATATGAAACCTAAGAATGCAGCATGTATAATGGGGGCATCTGCTAAGATCATTGAGGCAAGTCCCAAGAGGAACAGAATGTGTTCAGTTGAACCTTTATCTGTTCCCTTGAGAGCTCTTGATTTGCAAGAGAAATTGGAAGTGGCGCAACGCGGATCCAAGTTCAATGTGAATGAAAAACCTACTGAAAGTGAGAGGAGTAGCAACTTATATAAGTCTGCTCAAACCTTTAAAGGTTCAAGAGATTCGGAAAATAATAGCTTTCGCCTAGGTAAAGGAAAATCTGCTTCACTTGTAACACCACCCAAAACCGAGGTTCAAAGAAGGGATACATTGACTTTGAATGGAAATAGGAGATACTTGAAGATAAAAGAGATAAAATCTAACCAGAAAAATTATAATGGCCAAAACAGCAATGTTCTTAGACAGAAAAGTGTGACCAGAAAAGGTAAATCTACATCAAAAGTGGACACTAATAAGCCAACACAAACCAGTTCTTCAGAAAGTTCGATCGGAGCTAGGAAGACAGCAAACAAATGTGCTGTTAATACCAACATTGAATCCAAAAGGTCAAGCATAAGAATAACTGAGAAGCAAAAGGAGTTTTCAGTATCCGAAAGAAGGAGTTCTTCCGAAAAGAAGAGGCGTGATCAGAATGGCGCTCGCAATTCTGATAACGCAGTTAATACTTATGAAAGCAAGGCCATAAAATGTAATGTTACAATTGATGAAAATATTCACAATGATGCATATAGCATGACAGAAAACAGGGATGTCATTTCATTTACATTTACATCTCCATTGAGGAAAAACATGTCTGAGTCGCAGTCCACTACGGAGCAAGCAACGGAAACAATGACTGGAATTGATGTCGATTCTTTTGGTCACATTGATAAGGTTTATCCCAAAAAGTTATCATTATCTCCTACCAGGTTGAATGTAGTAGATGTTGATACATTAAGTGTCATGTTATCTCACATTAACCCACCTCAATGTACCTTGCAAATAGAAGGATGTTCTGTTGGTTTTAAATCAGTTTCGGAAGACAGATTTAACAGCATGGTATGTGACACATCAAGGGAACATGACAATAGCTTTCACATGAACCTGCTTAGTGATAAATTGGACAGCATGGATGAGAATTGTTGTTCTTCAAATTATAATGCTATGCTAAGCATGAATCAGCAACTTCAGATATCAGAACCAATGGAAGATTCGGGCTGTAACAACAACGATGAAAGCAGAAATGATTTATGTTATCAGCATACAAAAACTGTTGCTACTTTTGAAAATCCTTTCTTCAGTAAATGTTACTTAGATAGTGAAGAAAGTACATGTGGAGGCAGCAGAGTTTATTCTTCCATGCAAGATGAAGTAGTATATAGTTCTCAAATAAATGAATCTATATCACCTGAATACAAGATGAATTGGTCTGAGCAAAGCTCTACAAGATCAGCAAGAATGGTGGAACTTGAACATGTAAAGGATATACTCAGCAATGCAGAGTTGATGGAAGAAGAATTAATGGTGGGTGAGACCGACAACATAATAATGCGAACTCTCTTTGATCAGTTGGAGAATCAGAGAACTGAGGTAGAAAGCTATGAAGAGTACTCTAAGCTCAAAAGGAAAGCTATATTTGACTGTGTAAGTGAATGCTTAGAATTAAGATGTAGGCAAGTTTTTGTAGCAAGGTGCAAAGCATGGCCTAGATGCATGGTGGCATCAAAGAAGAGTTGGTTAGCAGAAGAAGTGTACAAGGAGATGTTGCAGTTTAGAAGTATGGAAGAAGAGATAATGGTGGATGAGCTTGTTAGGAAGGACATGAGCACTTCACTGGGTAGATGGATTGACTTTGACATTGAAGCCTTTGAAAATGACTTAGAATTTGAGCTTGACATAGTTACCTATTTGATAGATGAATTAGTTTCTGATTTGAGGCTTGTTTAA 2340 0.3726 MVMEKRSYKGSFLSFFDRNGKSQKKLFCHNSKLPDVSKHRRKENIEIMPMSQIKMDENGENPSSIASSDFNYALLSISSDDDEEGCGTNKSPGLVARLMGLDSLTQCYSNSHEKRVHSMAKPISSIKSHGYMKPKNAACIMGASAKIIEASPKRNRMCSVEPLSVPLRALDLQEKLEVAQRGSKFNVNEKPTESERSSNLYKSAQTFKGSRDSENNSFRLGKGKSASLVTPPKTEVQRRDTLTLNGNRRYLKIKEIKSNQKNYNGQNSNVLRQKSVTRKGKSTSKVDTNKPTQTSSSESSIGARKTANKCAVNTNIESKRSSIRITEKQKEFSVSERRSSSEKKRRDQNGARNSDNAVNTYESKAIKCNVTIDENIHNDAYSMTENRDVISFTFTSPLRKNMSESQSTTEQATETMTGIDVDSFGHIDKVYPKKLSLSPTRLNVVDVDTLSVMLSHINPPQCTLQIEGCSVGFKSVSEDRFNSMVCDTSREHDNSFHMNLLSDKLDSMDENCCSSNYNAMLSMNQQLQISEPMEDSGCNNNDESRNDLCYQHTKTVATFENPFFSKCYLDSEESTCGGSRVYSSMQDEVVYSSQINESISPEYKMNWSEQSSTRSARMVELEHVKDILSNAELMEEELMVGETDNIIMRTLFDQLENQRTEVESYEEYSKLKRKAIFDCVSECLELRCRQVFVARCKAWPRCMVASKKSWLAEEVYKEMLQFRSMEEEIMVDELVRKDMSTSLGRWIDFDIEAFENDLEFELDIVTYLIDELVSDLRLV* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1496 779 MobiDBLite consensus disorder prediction 255 308 - -
Mal1g1496 779 MobiDBLite consensus disorder prediction 321 358 - -
Mal1g1496 779 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 121 779 - -
Mal1g1496 779 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 106 - -
Mal1g1496 779 MobiDBLite consensus disorder prediction 183 243 - -
Mal1g1496 779 MobiDBLite consensus disorder prediction 192 223 - -
Mal1g1496 779 Pfam DUF761-associated sequence motif 78 104 IPR032795 -
Mal1g1496 779 MobiDBLite consensus disorder prediction 286 308 - -
Mal1g1496 779 Pfam Domain of unknown function (DUF4378) 620 771 IPR025486 -
Mal1g1496 779 MobiDBLite consensus disorder prediction 321 351 - -
Mal1g1496 779 MobiDBLite consensus disorder prediction 257 277 - -
Mal1g1496 779 PANTHER DUF4378 DOMAIN PROTEIN 121 779 - -
Mal1g1496 779 PANTHER DUF4378 DOMAIN PROTEIN 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1496 Mal-Chr1 19423231 19426296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1496 120 776 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 28.734 7.01e-50 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1496 - - mtr:MTR_1g083850 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1496 1 19423231 19426296 Mal1g1496 1 19423231 19426296 ECH