Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1480 ATGGATCATTTTTCATCCATGTTCAATGGATTGGCAAAGTCATTGAAAATGAAGAAAGGAAGGAGTAAATGTAGTGGGAGAGAAGCTGCTGAATCATTGGCAAAAGAAGCGAAAAGAAATCACTCTTGTATCAATAGCTCTGGCGTCGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTTAACCAAGATTGTTGCATAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGCCATGGACCTTGGGGCCACTATGTGTCAGGAAGAGTAAGAGAATCAATGCCATCATCTTTGCTATGCAACTGGCAGGAGACACTTTCTCAAACTTCAATTGATCCAGAAATTGATTTAAAGACACAGAAAAAACAACAACAGTTTAACATATGGAAGCATTCTTTCTTGAAGACATGTGCTTCAATTGATCGAGAACTAGAGCAGAATCGCAAGATTGATTCATTTTTCAGTGGAACGACTGCACTGTCGATTGTTAGACAGGGTGAACTCGTTGTGATTGCAAATGTTGGTGATTCTCGAGCTGTTTTAGCTACAACATCAGAAGATGGAAATTTGGTTCCAATTCAGCTAACAATAGATTTCAAGCCCAATTTACCTCAGGAAGCCGAGAGAATACTTGAATGCCAAGGGCGGGTGTTCTGCCTAGACGACGAGCCTGGGGTGCACCGCGTGTGGTTGCCGGACGCGGAGTCTCCCGGACTAGCGATGTCAAGGGCTTTTGGTGACTATTGTATGAAAGAGTATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATAACAAGCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGATTTGGGATGTGATCTCTAATCAAGAAGCAGTGGATATTGTGTCTTCAACAGAAGACAGAACAAGTTCATCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAATGCAAGAGGCAAGCTGTTAATATACAAATTGGAGAGGAGGTGGCTGTTAAGCTGGTATGTGAAGTTCTCTTCAATCATTTGACTCATTTTTATTGTTGA 1095 0.4183 MDHFSSMFNGLAKSLKMKKGRSKCSGREAAESLAKEAKRNHSCINSSGVVNVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHYVSGRVRESMPSSLLCNWQETLSQTSIDPEIDLKTQKKQQQFNIWKHSFLKTCASIDRELEQNRKIDSFFSGTTALSIVRQGELVVIANVGDSRAVLATTSEDGNLVPIQLTIDFKPNLPQEAERILECQGRVFCLDDEPGVHRVWLPDAESPGLAMSRAFGDYCMKEYGLISVPEVTQRNITSKDQFVVLATDGIWDVISNQEAVDIVSSTEDRTSSSKRLVECAMHAWKCKRQAVNIQIGEEVAVKLVCEVLFNHLTHFYC* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1480 364 ProSiteProfiles PPM-type phosphatase domain profile. 58 353 IPR001932 -
Mal1g1480 364 SUPERFAMILY PP2C-like 58 332 IPR036457 -
Mal1g1480 364 SMART PP2C_4 49 351 IPR001932 -
Mal1g1480 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 340 - -
Mal1g1480 364 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 340 - -
Mal1g1480 364 Pfam Protein phosphatase 2C 136 321 IPR001932 -
Mal1g1480 364 CDD PP2Cc 57 333 IPR001932 -
Mal1g1480 364 Gene3D - 40 339 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1480 Mal-Chr1 19178639 19184229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1480 1 338 PP2C-type Phosphatase Gene Family AT3G05640 67.544 1.39e-177 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1480 - - gmx:100793051 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4869 3 128751765 128753894 Mal1g1480 1 19178639 19184229 PCT