Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1478 ATGAACATGTCTTTATTTTCAAAGCAAGAAAAAGGTAATGATGGTGATACTAATAGGTTGAAAAAAGGACCATGGTCATCTGACGAGGATGAAAAATTAAGGGCATATGTACGTCAATATGGAGAGCGCAATTGGAATGCAGTACAAGAGAAAATTGGACTTCCTCGATGTGGTAAAAGTTGTCGTTTAAGATGGCTTAATCACTTACACCCAAATTTAAAAAAGGGTTCGATTACTGAAGAGGAAGAACAAAAAATCATTGAACTTCATGCCAGAATTGGACCAAGATGGGCTAAAATAGCTCAAGAGCTTCCTGGAAGATCCGATAATGAGATAAAGAACTTCTGGAATATAAGAAAAGAAAAATATTTAAGAAAAGGTTTGCCACTGTATGATCAAATGAAAAAACCACATGATGGTGAGTTGAATGACAATGGAGAGAGTAGTGTGAGCAACCAAGAGCTTGTTGATGGAGTGAAATTCAAAAGAGATATTTTCAGCGGAAACCATCCATCAATCTCAAATGAGCTAAATGGAAACAACTTTGAGCAACTTTCAAACTCATACCATGTCTCAATTATGCAGCCTCTAAATGTTTCAAATATGCTATGCAATAACGTGGCTAGTACTTCTATAAGCAATAACACTTCTCCATCATTAACTAATAGGGATCAAACTTCTTTTATGTGTACAACCACAGAATCAAATCTACCTCCATTTCCAGAATTTTTAGATTTTCAATCTCTTGACTCTCCAATGATTCAAAACGATCCTCTACTTCCACTTCAACCACCTGAGGAAATTCCACATGAGTCGTTTGAACCGGATTTTCCATGCAATGGTGGTTTGTTAGAATCCATGTTCTTTACAACAAAGATTTCGGAAGACTCGGATGCTAGTCACATGCATTCCAATGAGACAAGATCAGCTGATGAAAATGGGAAGAAGCCAATTTCTTTGGAGAAAGATGAATCAAACCATGAAGACTTAATAGATTCCATGTATGGCTTAGGTTGGTTAGATGATGTATCGCAATAA 1038 0.3642 MNMSLFSKQEKGNDGDTNRLKKGPWSSDEDEKLRAYVRQYGERNWNAVQEKIGLPRCGKSCRLRWLNHLHPNLKKGSITEEEEQKIIELHARIGPRWAKIAQELPGRSDNEIKNFWNIRKEKYLRKGLPLYDQMKKPHDGELNDNGESSVSNQELVDGVKFKRDIFSGNHPSISNELNGNNFEQLSNSYHVSIMQPLNVSNMLCNNVASTSISNNTSPSLTNRDQTSFMCTTTESNLPPFPEFLDFQSLDSPMIQNDPLLPLQPPEEIPHESFEPDFPCNGGLLESMFFTTKISEDSDASHMHSNETRSADENGKKPISLEKDESNHEDLIDSMYGLGWLDDVSQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1478 345 Gene3D - 77 140 - -
Mal1g1478 345 Gene3D - 21 74 - -
Mal1g1478 345 MobiDBLite consensus disorder prediction 12 28 - -
Mal1g1478 345 CDD SANT 24 69 IPR001005 -
Mal1g1478 345 MobiDBLite consensus disorder prediction 1 28 - -
Mal1g1478 345 CDD SANT 79 117 IPR001005 -
Mal1g1478 345 ProSiteProfiles Myb-like domain profile. 70 117 IPR001005 -
Mal1g1478 345 Pfam Myb-like DNA-binding domain 25 85 - -
Mal1g1478 345 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mal1g1478 345 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Mal1g1478 345 SMART sant 74 122 IPR001005 -
Mal1g1478 345 SMART sant 21 71 IPR001005 -
Mal1g1478 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Mal1g1478 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Mal1g1478 345 MobiDBLite consensus disorder prediction 296 329 - -
Mal1g1478 345 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1478 Mal-Chr1 19114580 19120056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1478 14 131 MYB Transcription Factor Family AT4G26930 63.559 6.65e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g1478 Myb_DNA-bind_6 3.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1478 K09422 - mtr:MTR_1g083630 263.077