Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1477 ATGTCGTCGGAGCCGCTGCTTCAACCGTCCGATACAGTGTCAGCCTCCCGGCAATGCGGCGGCGAACCGGCGGCGAGGATTTTCGAGGAATTGCCCAAAGCAAGTATCGTCTCCGTTTCGCGACCGGAGACCGGTGAAATAAGCCCAATCCTACTTTCTTATACAATTGAGTTGCAGTATAAACAGTTCAAGTGGTGTCTAAGGAAGAAAGCATCACAAGTTCTCTATTTACAATTTGCTTTGCGGAAACGTGCAATAATTGAAGAATTTCATGATAAACAAGAACAGGTAAAAGAGTGGCTACATAGCTTAGGAATAGTAGATCAAACGGTAATGGTGCAAGATGATGAAGAGCCTGATGATGGAGCTATACCTATACATCATGAAGACAGCGTTAAAAACAGATATGTGCCATCTGTTGCTGCTCTGTCAATAATTCGTCCATCACTAGGAGGTCAACAGTCAGTTGCCGATAAAGCCAAAGTTGCAATGCAGAATTATTTGGATCTCTTTTTAGGAAACCTAGAGATTGTGAATTCTCGAGAGGTCTGCAAGTTTTTGGAGGTCTCCAAGCTATCATTTTTACAAGAGTATGGTCCAAAACTGAGAGAGGGATATGTTACCGTGAGGCATTTGTCAAATATTTCACAGGATTCAGATGTAACATGCTTTCCATGTCATTGGTTTCACTTTTGTGATAACAATTGGAAGAAGGTATGGGCTGTTTTGAAACCTGGGTTTTTGGCGTTGCTAGATGATCCCTTCAACAACAAGCCGCTGGATATAATTACGTTTGATGTCCTTCCATCCTCAACTGGCAAGGGAGAGACCAAAGTATATTTAGCTGAACCTATAAAGGAACGCAATCCTTTGCGTTTCACATTTAAGGTTACTAGTGGAAACAGGAGCATATGCTTGAGAACTATCAGCAGTGCTAAAGTTAAAACTTGGGTTACTGCAATTAATGAAGCTGGTCTAAGACCTATGGAGGGTTGGTGTTGTCCTCACCGCTTTGGTTCATTTGCTCCCATAAGAGGTTTGACTGTAGATGGGAGCCAAGCCCAATGGTTTGTAGATGGACAAGCAGCATTTGAAGCAATTGCTTCTTCAATTCAAGATGCAAAATCAGAGATCTTCATAACAGGTTGGTGGCTTTGTCCAGAGCTATACCTGAGGCGGCCTTTTGATAGTTTTCCTACCTTAAGGTTAGACTCGTTATTGGAAGAAAAAGCTAAACAAGGGGTTCAGATCTATGTGCTTCTATACAAGGAGGTTTCTATAGCTTTAAAAATCAACAGCTCGTACAGTATGAGAAGACTGCTCAAAATTCATGAAAATGTTAGGGTATTACGCTATCCCGACCATTTTGCTTCTCGTGTGTATTTATGGTCGCACCATGAAAAACTTGTAATTATTGATTACAAGATTTGCTTTCTTGGAGGATTAGATTTATGCTTTGGACGATATGACACACCTGAACATAAAGTGGGTGATAGCCCCTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAACTCATGGGAAGACACCATGAGAGATGAATTGGATCGCCAAAAATATCCACGTATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCCAAGAGAACTAAAGCTCCAAATGAACATGAAATTCCTCTACTTATGCCTCACCATCACATGGTCATCCCGCATTACATGGGAAGAAGCAAAGAGATTGACATTGATGATAACAAGGATGAAGACGACAAGAAAGAAATTGACAGACAGGATTCATTCTCCTCACAATCTCCACTGCAAGATATACCGCTACTTTTACCTCAAGAAGCAGATGGAGCAGTTACCTCAAATGGAAATCATAGAAATTCCAGTGAATGTTCTCCATTATTGTCCCAAAATCTGGAAGGTGAAACTTTAGTTTCAGATAACCAGAATAAAGGGTTTCAAGATGAAGCTGTTCCTTTTAACTTGGGGGCTCAATGCGTTGTTGATGCCATAGATGATTGGTGGGAAACATCAGAAGGTACCAGTGATGCCACTACTTTGGAATATGGACAAGTTGGCCCACGTACTACTTGTCACTGTCAGGTAATCAGAAGTGTAAGCCAGTGGTCTGTTGGAACAAGTCAACCTGAAGAAAGCATTCACACTGCATATTGTTCTCTTATCGAAAAGGCAAAGCATTATATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAATGGATGACACAATACAGAATCGTATTTTGGAAGCAATATACAGGCGTATTTTGCAAGCCCACAAAGAACAGGAAGATTTCAGAGTTATAATTGTGATGCCCCTCTTGCCTGGCTTCCAGGGTGGTCTGGATGATGGTGGTGCTGCAACTGTGAGAGCCTTAACACATTGGCAGTATAGAACCATTTCTAGAGAAAATCACTCCATATTACACAATCTTGAAGCTATACTTGGTCATAAGACACATGATTATATTTCCTTTTATGGTCTAAGATCTCATGGTAGACTTCATCCAGATGGTCCTATGGCTACAAGCCAGGTATATGTGCACAGTAAGTTGATGATAATTGACGACCGTGTAGCTTTGATAGGATCATCCAATATAAATGACCGGAGTTTGCTTGGATCAAGAGACTCTGAGATTGGAGTGGTTATAGAAGACAAAGAATATGTTGAATCATTGATGAATGGAAAGCCGTGGAAGGCTGGGAAATTTTCCTATAGCCTGCGCTGTTCCCTATGGTCTGAGCACCTTGGTCTTAGTACTGGAGAGATTAATAAAATCACTGATCCAGTGGCTGATTCAACTTACAAGGATTTATGGTCAGAAACTGCAAAGGAAAATAGTAGAATCTACCATGAAGTTTTTGCTTGCATTCCCAATGATGAGATACACTCAAGAGCTGCACTTCGGCAAAGCATGGTCCACTGGAAGGAAAAACTTGGCCAAACCACCATAGATTTGGGAATAGCCCCTGATAAGTTAATATATCATGAGAACGGAGAAACAAAAGTAATAGACCCAATAGATAGATTGAAGTGTATAAAGGGACATCTTGTTTCCTTTCCTTTGGATTTCATGCGTGAAGAAGATTTAAGACCAGCTGTTATTGAAAGTGAGTTTTATGTAGCTCCTCAAGTATATCATTAA 3225 0.4115 MSSEPLLQPSDTVSASRQCGGEPAARIFEELPKASIVSVSRPETGEISPILLSYTIELQYKQFKWCLRKKASQVLYLQFALRKRAIIEEFHDKQEQVKEWLHSLGIVDQTVMVQDDEEPDDGAIPIHHEDSVKNRYVPSVAALSIIRPSLGGQQSVADKAKVAMQNYLDLFLGNLEIVNSREVCKFLEVSKLSFLQEYGPKLREGYVTVRHLSNISQDSDVTCFPCHWFHFCDNNWKKVWAVLKPGFLALLDDPFNNKPLDIITFDVLPSSTGKGETKVYLAEPIKERNPLRFTFKVTSGNRSICLRTISSAKVKTWVTAINEAGLRPMEGWCCPHRFGSFAPIRGLTVDGSQAQWFVDGQAAFEAIASSIQDAKSEIFITGWWLCPELYLRRPFDSFPTLRLDSLLEEKAKQGVQIYVLLYKEVSIALKINSSYSMRRLLKIHENVRVLRYPDHFASRVYLWSHHEKLVIIDYKICFLGGLDLCFGRYDTPEHKVGDSPSVIWPGKDYYNPRESEPNSWEDTMRDELDRQKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHEIPLLMPHHHMVIPHYMGRSKEIDIDDNKDEDDKKEIDRQDSFSSQSPLQDIPLLLPQEADGAVTSNGNHRNSSECSPLLSQNLEGETLVSDNQNKGFQDEAVPFNLGAQCVVDAIDDWWETSEGTSDATTLEYGQVGPRTTCHCQVIRSVSQWSVGTSQPEESIHTAYCSLIEKAKHYIYIENQFFISGLAMDDTIQNRILEAIYRRILQAHKEQEDFRVIIVMPLLPGFQGGLDDGGAATVRALTHWQYRTISRENHSILHNLEAILGHKTHDYISFYGLRSHGRLHPDGPMATSQVYVHSKLMIIDDRVALIGSSNINDRSLLGSRDSEIGVVIEDKEYVESLMNGKPWKAGKFSYSLRCSLWSEHLGLSTGEINKITDPVADSTYKDLWSETAKENSRIYHEVFACIPNDEIHSRAALRQSMVHWKEKLGQTTIDLGIAPDKLIYHENGETKVIDPIDRLKCIKGHLVSFPLDFMREEDLRPAVIESEFYVAPQVYH* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1477 1074 Pfam Phospholipase D Active site motif 461 488 IPR001736 GO:0003824
Mal1g1477 1074 ProSiteProfiles PH domain profile. 200 326 IPR001849 -
Mal1g1477 1074 PANTHER PHOSPHOLIPASE D 23 1071 IPR015679 -
Mal1g1477 1074 PANTHER PHOSPHOLIPASE D ZETA 2 23 1071 - -
Mal1g1477 1074 SMART pld_4 461 488 IPR001736 GO:0003824
Mal1g1477 1074 SMART pld_4 870 897 IPR001736 GO:0003824
Mal1g1477 1074 CDD PLDc_vPLD1_2_yPLD_like_2 730 914 - -
Mal1g1477 1074 CDD PH_PLD 178 324 - -
Mal1g1477 1074 SUPERFAMILY Phospholipase D/nuclease 324 581 - -
Mal1g1477 1074 SUPERFAMILY Phospholipase D/nuclease 708 920 - -
Mal1g1477 1074 CDD PLDc_vPLD1_2_yPLD_like_1 354 498 - -
Mal1g1477 1074 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 461 488 IPR001736 GO:0003824
Mal1g1477 1074 SMART PH_update 201 328 IPR001849 -
Mal1g1477 1074 SUPERFAMILY PH domain-like 234 327 - -
Mal1g1477 1074 Gene3D Endonuclease Chain A 348 584 - -
Mal1g1477 1074 Gene3D Endonuclease Chain A 691 934 - -
Mal1g1477 1074 MobiDBLite consensus disorder prediction 598 614 - -
Mal1g1477 1074 PIRSF PLD_euk 33 595 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mal1g1477 1074 PIRSF PLD_euk 588 1074 IPR016555 GO:0004630|GO:0006654|GO:0048017
Mal1g1477 1074 Pfam PLD-like domain 743 917 IPR025202 -
Mal1g1477 1074 Gene3D - 202 324 IPR011993 -
Mal1g1477 1074 MobiDBLite consensus disorder prediction 598 626 - -
Mal1g1477 1074 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 870 897 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1477 Mal-Chr1 19101279 19112156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1477 26 1074 Phospholipase D Gene Family (Wang group) AT3G05630 66.352 0.0 1420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1477 K01115 - gmx:100796914 1911.73