Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1472 ATGAAAACATCAACTACCTTGTACACTATTTTTTCCCTCTTTAACATCCTATTCCTCTCTCCCTCTCTAGCATCTCTCCTTTCCTCCCCAAATAACACATGCAACCTTACACCCTACCCATCATTCTGTTTAACTACTCTTCCCTCTCACTATTTATCCATAGATGACCAAACCCTTTTCTTCCTTCAACAATCCTTATCAATAACTAGAAACAATTTTCAATTAATCTCCTCTTTTATTAACCAACTCAACATTCCATTTTCCACTTTACTTGTCCTTCAAGATTGTCTTAATCTTTCTGAATTAAACATTGATTTTTTGTCCAATGTCCTCCAAGCCATGGAAACCATTAGTACTACTAATCAAGCCTATTATTTGCAAACCTTGCTTAGTGCTGTTTTAACTAATCATCAAACATGTTTAGATGGTTTTCATGAGGTAATTCCTTATCCAAAAATTAGCACTACCTTATCAAACCTTCTTTCTGATGCGAACAAACTTTATAGGATTTCTCTTCAGTTTTTCACTCAAAGTCGGGTTAACACCGTCATTGCAAGATTAACACCAAAGATAACAATTACAACGAATAATAGAAAGTTGTTACAGACAAGTGTTGACAATGTAATGGTGACACAAAAAGTGGTTGTTAACCCTGATGGATCTGGTGATTTTGTCACCATAAATGATGCTGTGCATGCTGCACCTAACAAAACAGGCACCAACAATGGGTACCATGTAATTTATGTTGTTGCTGGGATTTATAATGAGTATGTTTCTATTGATAAGAGTAAAGAGAATCTAATGATCGTTGGAGATGGCATTGGTCGGACTATCATCACTGGTAATCGTAGCGTGGTTGATGGTTGGACTACTTTTCAATCTGCAACTTTTGCTGTAACTGGAAAAGGATTTGTTGCGGTGAACATTACATTTCAAAACACCGCGGGATCCAGCAAGCATCAAGCAGTTGCAGTAAGAAACGGAGCTGACATGTCAGTTTTCTACAATTGTAGCTTCGAAGGTTACCAAGACACACTATACGCGCATTCCCTAAGACAATTCTACAAAAACTGCGACATTTATGGAACAGTAGATTTCATATTTGGTAATGCAGCTGCAATATTCCAAAATTGTAACATGTATCCAAGACTCCCAATGCAAAATCAATTCAATGCAATTACAGCACAAGGAAGAACAGATCCTAACCAAAACACAGGGTTCTCTATATGGAATTGTTACATTGTAGCAGCTAGTGAATTGGGGGGTGCAAGTAATAATTTTAATGATATAAAGACATATTTGGGTAGGCCTTGGAAGGAGTATTCAAGGACAATTTATATGCAAAGTTTTATTGATGGTTTGATTGATCCAAAGGGATGGATGGAATGGTCAGGGGAATTTGCATTAAGCACATTGTATTATGCAGAATATGCTAATTGGGGACAAGGTTCAAATACTAGTAATAGGGTCACATGGGAAGGGTACCATTTAATTGATGGAAAAGATGCAGATGAATTCACTGTGTACAAATTTATACAAGGTGACACGTGGTTGCCCATGACAGGAGTGCCTTTCAGAGCTGGATTTCAGTGA 1593 0.3723 MKTSTTLYTIFSLFNILFLSPSLASLLSSPNNTCNLTPYPSFCLTTLPSHYLSIDDQTLFFLQQSLSITRNNFQLISSFINQLNIPFSTLLVLQDCLNLSELNIDFLSNVLQAMETISTTNQAYYLQTLLSAVLTNHQTCLDGFHEVIPYPKISTTLSNLLSDANKLYRISLQFFTQSRVNTVIARLTPKITITTNNRKLLQTSVDNVMVTQKVVVNPDGSGDFVTINDAVHAAPNKTGTNNGYHVIYVVAGIYNEYVSIDKSKENLMIVGDGIGRTIITGNRSVVDGWTTFQSATFAVTGKGFVAVNITFQNTAGSSKHQAVAVRNGADMSVFYNCSFEGYQDTLYAHSLRQFYKNCDIYGTVDFIFGNAAAIFQNCNMYPRLPMQNQFNAITAQGRTDPNQNTGFSIWNCYIVAASELGGASNNFNDIKTYLGRPWKEYSRTIYMQSFIDGLIDPKGWMEWSGEFALSTLYYAEYANWGQGSNTSNRVTWEGYHLIDGKDADEFTVYKFIQGDTWLPMTGVPFRAGFQ* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1472 530 SUPERFAMILY Pectin lyase-like 213 527 IPR011050 -
Mal1g1472 530 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 156 IPR006501 GO:0004857
Mal1g1472 530 CDD PMEI-like_3 34 176 - -
Mal1g1472 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 177 IPR035513 -
Mal1g1472 530 SMART PMEI_2 25 174 IPR006501 GO:0004857
Mal1g1472 530 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 20 528 - -
Mal1g1472 530 Pfam Pectinesterase 214 515 IPR000070 GO:0030599|GO:0042545
Mal1g1472 530 Pfam Plant invertase/pectin methylesterase inhibitor 31 161 IPR006501 GO:0004857
Mal1g1472 530 Gene3D - 207 529 IPR012334 -
Mal1g1472 530 PANTHER PECTINESTERASE 20 528 - -
Mal1g1472 530 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Mal1g1472 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 176 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1472 Mal-Chr1 19051742 19053819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1472 7 529 Carbohydrate Esterase AT4G02330 48.070 4.67e-178 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1472 K01051 - gmx:100810329 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1472 1 19051742 19053819 Mal1g1472 1 19051742 19053819 ECH