Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1471 ATGGTTGAAGAAGATACACACAAGAAGAGGAGATTCGTCATAATCGGCGTCTCAACCTTTTTACTAGTGGCTATGGTGGTTGCCGTTACGGTTAGTGTAAGTTTTGGTATTAACAATGATTCAAAGAATAACAACGATAAGGCGCATATGGCTTCCACCGTAAAAGCAGTGAAAAGCTTTTGTCATCCAACCGATTACAAAAAAGAATGTGAGGAAAATCTAGTTGCAAAGGCGGGCAACACAACGGATTCAAAAGAACTCATTAAATATGCTTTCAATATCACCATTACAAAACTTCGCGATGGAATCAAGAAAACCAATCTTTTGCATGAGGTTGAGAAGGAACCAAGGGCGAAAATGGCGCTTGAAACATGCAAGCAATTAATGGATCTATCTATTGGTGAATTTGATAGGTCAATTGAGAGAATAAAAAAATTTGATCTTGATAATTTAGAGAACATTCTTGTGAGTTTAAAGGTTTGGTTAAGTGGTGCAATTACATACCAAGAAACTTGTTTAGATGGTTTTGAGAATACCACTAGTGATGCTAGTAAGAAAATGAAGAGTATTTTAACTACTTCAATGCATATGAGTAGCAATGCACTTGCTATCATTTCGGATTTGGCGAAAAGTGTGTTGGATTTGAATGTGACAAGAGATGGACGTCGTCTTATCGATGGTTATAAGGGTGATTATGTGGGTGAACAAGTTGTTGCTCATGATGATGTTAATGATGTTCCTTCTTGGGTTGGTGATGGTTCAAGTGTTGGTGTTCGTAGACTCCTTCATGTATCTCAACATAAACTCAAGGCTAATGTGGTTGTGGCTAAAGATGGTAGTGGAAAGTTTAAGAGTATCAATGATGCTTTGAAACAGGTGCCAAAGAAGAACCAAAAACCTTTTGTTATTCATATCAAGGAGGGTGTTTATCATGAGTATGTTGAAGTTACCAAGCAAATGACTCATGTTGTGTTTGTTGGTGATGGTAGCAACAAGACAAGAATTACTGGCAACAAAAATTATATAGATGGGATTAACACTTACCTAACCCCCACGGTTGCTATTCAAGGAGATTACTTTGTAGCCATGAGTATAGGATTTGAGAATTCAGCTGGACCTCACAAACATCAAGCAGTAGCTGTAAGGGTCCAAGCAGACAAGACAATTTTTTACAAATGTTCAATGGACGGATATCAAGACACATTATACGTACACACGATGCGCCAATTTTATCGTGATTGTACAATTTCAGGCACAATTGATTTCATCTTTGGCGACGCAGTAGCCGTTTTCCAAAACTGCACTTTCTTAGTTAAAAAACCATTAGAAAACCAACAATGCATTGTAACTGCACAAGGCAGAAAAGAACAACATCAACCATCAGGAATGGTTATTCAAAATTGTTACATTGTGTCGGATACGCACAATGTGAAATTCGACAACAAAGCCTATCTCGCGCGTCCGTGGAAGAATTTCTCAAGGACTGTTTTCATGAAAACTTACATAGGAGATTTGATTCAGCCTGATGGGTTTATGCCATGGCAAGGAGCAAATGGTACACTTTCTGGCATGGACACATGCTTTTATGCTGAATTTGATAATACTGGTCCTGGATCGGATAAATCAAAGCGTGTAAAATGGCCTGGGATTAAGACTCTTACGTCACAATCTGCAAGTGATTTTTTACCATCTATGTTCTTTCATGGAGATGATTGGATTAAGGTTACAAGAATTCCTTACTCTTCTGGAGAGAAATCCACCAAGAAGTAA 1770 0.3802 MVEEDTHKKRRFVIIGVSTFLLVAMVVAVTVSVSFGINNDSKNNNDKAHMASTVKAVKSFCHPTDYKKECEENLVAKAGNTTDSKELIKYAFNITITKLRDGIKKTNLLHEVEKEPRAKMALETCKQLMDLSIGEFDRSIERIKKFDLDNLENILVSLKVWLSGAITYQETCLDGFENTTSDASKKMKSILTTSMHMSSNALAIISDLAKSVLDLNVTRDGRRLIDGYKGDYVGEQVVAHDDVNDVPSWVGDGSSVGVRRLLHVSQHKLKANVVVAKDGSGKFKSINDALKQVPKKNQKPFVIHIKEGVYHEYVEVTKQMTHVVFVGDGSNKTRITGNKNYIDGINTYLTPTVAIQGDYFVAMSIGFENSAGPHKHQAVAVRVQADKTIFYKCSMDGYQDTLYVHTMRQFYRDCTISGTIDFIFGDAVAVFQNCTFLVKKPLENQQCIVTAQGRKEQHQPSGMVIQNCYIVSDTHNVKFDNKAYLARPWKNFSRTVFMKTYIGDLIQPDGFMPWQGANGTLSGMDTCFYAEFDNTGPGSDKSKRVKWPGIKTLTSQSASDFLPSMFFHGDDWIKVTRIPYSSGEKSTKK* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1471 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 210 IPR035513 -
Mal1g1471 589 PANTHER PECTINESTERASE 10 586 - -
Mal1g1471 589 CDD PMEI-like_3 59 210 - -
Mal1g1471 589 Gene3D - 269 585 IPR012334 -
Mal1g1471 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Mal1g1471 589 SUPERFAMILY Pectin lyase-like 270 582 IPR011050 -
Mal1g1471 589 TIGRFAM PME_inhib: pectinesterase inhibitor domain 34 208 IPR006501 GO:0004857
Mal1g1471 589 Pfam Pectinesterase 272 570 IPR000070 GO:0030599|GO:0042545
Mal1g1471 589 SMART PMEI_2 52 204 IPR006501 GO:0004857
Mal1g1471 589 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Mal1g1471 589 ProSitePatterns Pectinesterase signature 2. 416 425 IPR033131 -
Mal1g1471 589 PANTHER PECTINESTERASE 10 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1471 Mal-Chr1 19048577 19050611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1471 3 583 Carbohydrate Esterase AT3G05610 48.552 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1471 K01051 - gmx:100794799 835.869