Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1470 ATGTCAGGAGGAGATGCACAAAAAGGAAGGAGAGTCGCCATAATTGGTGTATCTAGCTTGTTATTGGTGGCTATGGTTGTTGCTGTCACAGTTGGCGTCAATCGAAACCAAAATGGTGTTGAAGACGATATAGAAGACAACAAAAAGAACCATATTACTTCAACAATGAAAGCAGTTCAAGCCATTTGTCATCCCACCGAATACAAGAAAGAATGTGAGGAGACCCTCGCAGCAGAGGCAGAGGCAGGCGGTGTCACAGACCCAAAACAACTTATTAAAATAGCATTCAATGTTACCATCTCTAAAATTGGAGAAAAACTCAAGGAAACTGATCTCATGCGCGAGGTTGAGAAGGATCCTAGATCCAAGGATGCACTTGATACTTGCAAGGAGCTTATGGATCTTTCGATAGGTGAATTCACAAGGTCACTTGATGGAATAGGTGAGTTTGATTTTCTACATGTTGACAAAATCCTCATGAATTTGAAAGTTTGGCTCAGTGGTGCTGTCACATACATGGATACATGCATCAATGGATTTGAAAATAGTACCAGTGACGCTGGTAAAAAGATGAAAGACTTATTAACATCAAGCATGCACATGAGTAGCAATGCCCTTGCTATCATTTCAGATTTTTCTGACACTGTCTCTAATTGGAACGCCACCAAACTTCTTGGACGTCGTCTTCTTCAAGATTCTGAGACTCCTTCTTGGGTTGAACATCGCATACTCCTTGATGCAAAAGCAAACACATTAAAACCCAAGCCTAATGTTACCGTAGCTTTAGATGGTAGTGGTGATTTTAAGAGCATCAATGAGGCATTGAAAAAGGTTCCTGATGAGAAAAGCAAACAACCATTTGTGATCTACATTAAGGCGGGTGTTTACCCCGAGTATGTTGAAGTTTCAAAAAATATGACTTATGTTGTGTTTGTGGGTGATGGTGGTAAGAAGTCAATAATCACCGGCAACAAAAACTTTATCGATGGGGTTAACACCTATAAAACCGCCACTGTTGCTATTCAAGGAGATCACTTTACCGCCATTAACATGGGTTTTGAGAACTCAGCTGGTCCACACAAACATCAAGCAGTGGCACTAAGGGTTCAAGGAGATAAGGCCATCTTCTTCAATTGCTCAATGGATGGATATCAAGACACACTTTATGTGCACACCATGCGTCAATTCTACCGCGACTGCACCATTTCAGGTACCATTGACTTTGTCTTTGGTAATGCAGAATCTGTATTCCAAAACTGCAAATTCGTGGTCAGAAAGCCTATGCCAAACCAACAATGCATTGTGACTGCACAAGGAAGGAAAGAAAAATACCACCCATCAGCAATAGTCATTCAAGGAGGCTCTATTGTTTCTGACCCCGAGTTCTACCCAGTCAGGTTTGACCACAAGGCCTACCTAGCCCGTCCGTGGAAGAACTTCTCTAGGACTATCATCATGGATACATTCATCGATGATTTGATACATCCGGATGGTTTTTTGCCATGGCAAACATTAGAGGGGCCTACTAACATGAACACTTGCTTCTATGCTGAGTACCATAACTATGGCCCTGGTTCAGACAAATCAAAGCGTGTGAAATGGGCTGGAATCTTGAACCTCAATTCAAAGGGTGCACATTGGTTTGCACCATCCAAGTTCTTCCATGGTGGTGACTGGATTGAGTCAACTGGAATTCCTTACTTTTCAAGTATTCCTGAACACAAGAAGCACAAAAAGACATTGCTTAAATGGTGA 1755 0.4182 MSGGDAQKGRRVAIIGVSSLLLVAMVVAVTVGVNRNQNGVEDDIEDNKKNHITSTMKAVQAICHPTEYKKECEETLAAEAEAGGVTDPKQLIKIAFNVTISKIGEKLKETDLMREVEKDPRSKDALDTCKELMDLSIGEFTRSLDGIGEFDFLHVDKILMNLKVWLSGAVTYMDTCINGFENSTSDAGKKMKDLLTSSMHMSSNALAIISDFSDTVSNWNATKLLGRRLLQDSETPSWVEHRILLDAKANTLKPKPNVTVALDGSGDFKSINEALKKVPDEKSKQPFVIYIKAGVYPEYVEVSKNMTYVVFVGDGGKKSIITGNKNFIDGVNTYKTATVAIQGDHFTAINMGFENSAGPHKHQAVALRVQGDKAIFFNCSMDGYQDTLYVHTMRQFYRDCTISGTIDFVFGNAESVFQNCKFVVRKPMPNQQCIVTAQGRKEKYHPSAIVIQGGSIVSDPEFYPVRFDHKAYLARPWKNFSRTIIMDTFIDDLIHPDGFLPWQTLEGPTNMNTCFYAEYHNYGPGSDKSKRVKWAGILNLNSKGAHWFAPSKFFHGGDWIESTGIPYFSSIPEHKKHKKTLLKW* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1470 584 Gene3D - 252 571 IPR012334 -
Mal1g1470 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Mal1g1470 584 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Mal1g1470 584 Pfam Plant invertase/pectin methylesterase inhibitor 58 208 IPR006501 GO:0004857
Mal1g1470 584 SMART PMEI_2 54 208 IPR006501 GO:0004857
Mal1g1470 584 SUPERFAMILY Pectin lyase-like 253 568 IPR011050 -
Mal1g1470 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 212 IPR035513 -
Mal1g1470 584 Pfam Pectinesterase 257 556 IPR000070 GO:0030599|GO:0042545
Mal1g1470 584 PANTHER PECTINESTERASE 10 572 - -
Mal1g1470 584 PANTHER PECTINESTERASE 10 572 - -
Mal1g1470 584 CDD PMEI-like_3 61 213 - -
Mal1g1470 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1470 Mal-Chr1 19044329 19046319 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1470 5 571 Carbohydrate Esterase AT3G05610 48.330 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1470 K01051 - gmx:100815272 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4877 3 128828977 128831204 Mal1g1470 1 19044329 19046319 PCT