Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1467 ATGGGTATCGATCTCAAGGCAGGAGGTAAGAGCAAAAAGTCGAAAAGAACAGCACCAAAATCCAATGATATTTATCTCAAGCTTTTGGTCAAGCTTTATCGGTTCCTTGTTCGGAGAACTGGCAGCAGTTTCAATGCTGTTATACTCAAGAGGTTGTTCATGAGCAAGGTTAACAAGCCTCCACTATCTTTGTCAAGGTTGATCAAGTATACCAATGGGAAGGAAGGTAAAATTGCTGCAGTGGTGGGGACTATAACTGATGATATCCGTGTTAATGAAGTTCCAGCCATAAAGGTTACAGCACTCAGGTTTACTGAGAGGGCAAGGTCGAGAATAGAAAAGGCCGGTGGTGAATGCTTGACATTCGATCAGTTGGCTCTTAGGGCCCCTCTTGGACAAAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCAGTGAAGCACTTTGGTCGTGCTCCTGGTGTCCCACAAAGCCACACCAAACCTTATGTTAGAGGAAAGGGTAGGAAGATGGAGAAGGCTAGAGGAAAGAGGAAGAGCCGAGGATTCAGAGTTTGA 564 0.4557 MGIDLKAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTGSSFNAVILKRLFMSKVNKPPLSLSRLIKYTNGKEGKIAAVVGTITDDIRVNEVPAIKVTALRFTERARSRIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPQSHTKPYVRGKGRKMEKARGKRKSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1467 187 PANTHER BNAC02G39900D PROTEIN 1 187 - -
Mal1g1467 187 Gene3D - 1 187 - -
Mal1g1467 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Mal1g1467 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Mal1g1467 187 MobiDBLite consensus disorder prediction 153 187 - -
Mal1g1467 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Mal1g1467 187 MobiDBLite consensus disorder prediction 165 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1467 Mal-Chr1 18962375 18963947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1467 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 75.806 1.06e-101 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1467 K02883 - gmx:100527681 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1467 1 18962375 18963947 Mal1g1467 1 18962375 18963947 ECH
Mal3g4892 3 128947743 128950169 Mal1g1467 1 18962375 18963947 PCT