Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1464 ATGGGTCGTGTAGATGCAGCTGGTTCCAAGGGAAAGAAGAAGGGAGTGATAACATTCACCATTGACTGCGCTAAGCCCGTTGAAGACAAGATCATGGACATTGCATCTCTCGAAAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGTAAACCTGGTGCTCTTGGTGATGCTGTTACTGTTTCACGCGAAAAAAGCAAGATCACTGTCACTTCTGATAGCAACTTCTCCAAAAGGTATCTCAAGTACTTGACCAAAAAGTATTTGAAGAAACACAATGTACGTGACTGGCTCAGAGTGATTGCTTCTAACAAAGACAGAAATGTTTATGAACTGAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGATGAAGATTAA 378 0.418 MGRVDAAGSKGKKKGVITFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKPGALGDAVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEDED* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1464 125 Gene3D - 6 125 IPR038526 -
Mal1g1464 125 PANTHER 60S RIBOSOMAL PROTEIN L22 5 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mal1g1464 125 Pfam Ribosomal L22e protein family 17 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Mal1g1464 125 PANTHER - 5 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1464 Mal-Chr1 18916697 18917949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1464 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.000 2.65e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1464 K02891 - nnu:104598935 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1464 1 18916697 18917949 Mal1g1464 1 18916697 18917949 ECH
Mal3g4896 3 129033566 129034833 Mal1g1464 1 18916697 18917949 PCT