Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1454 ATGGATTCCAACAACAAATCTCCCGAACAAGTCATTTCAGAAATGATTGAAATGGGTTTTGAGCATTCCAAAATTCTCGAAGGTATAAAAGTAGTGGGTCCATCGATTCCCAACGTTGTGGAACATATCTTCAATACTAATACTAGCAGTAGTTGTAATCGTGAACCATCCACTACCCATGTCACAAAATCATCTGCAAGTAATGGGAAAGCTCTCAAAAAACGAGCTTTTTCATCTTCACTTCAAGTTTCAAAGCCAAGAACAATCAACCATTATTTTCAATCCACTAATAAAGTCAATGAGAAAAACAAAGATGTTGTTGTTGTTGATGATGGTGATGATGATGTGGAAGGGCACAAGGAGTCTTTACCGCGAATGGGATTTGATCATGATACCAGTGTAGCTCAAGATTTGGATGTTGCATCTGATTGGGAGCAGAAAGCTAGCATTATGTTGCAAAAGCATTTTGGTTTTTCATCCTTGAAAAGTTTTCAGAAGAAAGCTCTGTCTGCTTGGATTGCTCATAGAGACTGTCTTGTCCTGGCTGCAACTGGATCTGGGAAATCTCTGTGCTTTCAGATTCCTGCATTGTTAACTGGGAAAGTGGTGGTTGTGATTTCGCCTTTAATAAGCCTAATGCATGATCAATGCTTAAAGCTAACAAAACATGGAATCAGTGCTTGCTTTCTTGGCTCTGGACAGCCTGATAATACTGTTGAAAAGAAAGCAATGAGAGGCATGTATAGTATAGTGTATGTTTGTCCAGAGACAGTCCTAAGATTGATTCAACCGTTACAGAAGCTTGCTGAAACCCATGGTATTGCTTTGTTTGCAATTGATGAGGTACATTGTGTTTCTAAATGGGGTCATGATTTTCGTCCAGCTTACAGCCGACTGTCTGCATTGAGGGAAAATTTCACTACTGGCAAGCTAAAATCCTTGAAATTTGATATACCTGTAATGGCATTGACAGCTACAGCTACAAAGAGAGTTCGAGAAGACATTTTAAAATCGCTGCGTTTGTCAAAAGATACAAGTGTTGTTTTCACATCATTTTTTCGACCTAATTTACGCTTCATGGTAAAGCATAGTAGAACATCATGGGCTTCTTATGAGAGAGATTTTCATGAATTGATTAAAGTATATGGTGGAAATAAAAAAGCTTTCACCTCAGATGATGCAGATGGTGTTTCCATTAGCTCTGATGCTTCTGATACAGACAGTGTTTCTTCTTATGATGTGGACGACCAAGATGACTGTGATGATAGAGATATTAATGTATTGCACTCAGGAAACACCGGAAATCATAAAAAAAGAAGAAAATTGACAATTGAGTTTCTGGAAAATGATGTTGATGTCTTTCAAAGTGCGGATGACTTGGATGTTACCTGTGGTGAATTTTGTGTACAACCTCCTCCCAAGCAATGTGCGTTATCTGAGACAATTGATCCACCTACGAAACCAGAAAAAAGACTCAAAATGCTTAAGGAGCCTTTGGGACAAGGACCTACAATTATATATGTACCCACCAGAAAAGATACAGTGAGAATTGCTAAGTATCTCTGCAAGTCTGGTGTGAAGGCTGCCGCTTATAATGCCGGGCTGCCCAAGTTGCATCTAAGAAGGACTCATAAAGAGTTTCATGAAAATACTTTAGAGGTTGTTGTTGCAACAATAGCGTTTGGAATGGGAATTGATAAATCGAATGTTAGAAGAATCATCCACTACGGTTGGCCGCAGAGTTTGGAAGCCTACTACCAAGAAGCTGGACGGGCTGGTCGAGATGGCAAGTTAGCAGATTGCATTCTATATGCAAACCTAGCAAGGAAGCCATCACTTTTGCCAAGTCGTAGAAGTGAAGATATGACAAAACAAGCATATATCATGTTGTCCGATTGTTTCAGATATGGAATGAATACTTCATGTTGTCGAGCAAAGATACTTGTAGAATACTTCGGAGAGGATTTCAGCCATCAGAAATGTCTCTTGTGTGATGTGTGCACTAACGGACCACCTCAAAAACAGAATCTAAAAGAGGAGGCCTGTAGTTTACTGCAAACTATAATGCGGTACCATAATGCACATAGCTATTCCATGGATTGCTCATATAATGATGATATCCATTTTGATTCCAAGGAGAGAAGACAAGGAGAGAGGCCAAGTCTTATGATGTTAGTTAGAAGTATAAGGGAGCAGTTTCAAAAGTTTTTAACCACTGATATATTGTGGTGGAGAGGCCTTACTCGAATTTTGGAAGCTAAAGGATATATCAGGGAAGGAGATGACAAGACCAATGTTCAGATAAAATACCCGGAACTAACCAAACTAGGTTTGGAATTTGTGAAGTCCATGACTGAAGAAACTTTCTATGTTTACCCTGAGGCAGATATGTTGCTTGAAACAAAAACTGACAAACCATTTTCCTCATTCTCAGAATGGGGAAAAGGTTGGGCTGATCCTGAGATCCGTCGCCAGCGCCTAGAAAGAATGCAACGCGATAGAAGTCCAACGAAGCGGAAGAGCCCCAGAAAGCAAAGAAAGAGGAAAGCTAGAAAAGTGAAACCTGATTTGAGGACTTCTCGAGGTAGATTAACAGCAAAACTCTCAAAACACAAGTGA 2619 0.3967 MDSNNKSPEQVISEMIEMGFEHSKILEGIKVVGPSIPNVVEHIFNTNTSSSCNREPSTTHVTKSSASNGKALKKRAFSSSLQVSKPRTINHYFQSTNKVNEKNKDVVVVDDGDDDVEGHKESLPRMGFDHDTSVAQDLDVASDWEQKASIMLQKHFGFSSLKSFQKKALSAWIAHRDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMRGMYSIVYVCPETVLRLIQPLQKLAETHGIALFAIDEVHCVSKWGHDFRPAYSRLSALRENFTTGKLKSLKFDIPVMALTATATKRVREDILKSLRLSKDTSVVFTSFFRPNLRFMVKHSRTSWASYERDFHELIKVYGGNKKAFTSDDADGVSISSDASDTDSVSSYDVDDQDDCDDRDINVLHSGNTGNHKKRRKLTIEFLENDVDVFQSADDLDVTCGEFCVQPPPKQCALSETIDPPTKPEKRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCLLCDVCTNGPPQKQNLKEEACSLLQTIMRYHNAHSYSMDCSYNDDIHFDSKERRQGERPSLMMLVRSIREQFQKFLTTDILWWRGLTRILEAKGYIREGDDKTNVQIKYPELTKLGLEFVKSMTEETFYVYPEADMLLETKTDKPFSSFSEWGKGWADPEIRRQRLERMQRDRSPTKRKSPRKQRKRKARKVKPDLRTSRGRLTAKLSKHK* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1454 872 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 6 46 IPR015940 -
Mal1g1454 872 MobiDBLite consensus disorder prediction 397 417 - -
Mal1g1454 872 PANTHER DNA HELICASE RECQ FAMILY MEMBER 2 861 - -
Mal1g1454 872 MobiDBLite consensus disorder prediction 822 872 - -
Mal1g1454 872 Gene3D - 479 605 IPR027417 -
Mal1g1454 872 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 487 649 IPR001650 -
Mal1g1454 872 Pfam DEAD/DEAH box helicase 164 332 IPR011545 GO:0003676|GO:0005524
Mal1g1454 872 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 169 345 IPR014001 -
Mal1g1454 872 SMART helicmild6 515 596 IPR001650 -
Mal1g1454 872 Pfam Helicase conserved C-terminal domain 487 595 IPR001650 -
Mal1g1454 872 Gene3D - 124 353 IPR027417 -
Mal1g1454 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 606 IPR027417 -
Mal1g1454 872 Gene3D - 608 792 IPR036388 -
Mal1g1454 872 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE SIM 2 861 - -
Mal1g1454 872 MobiDBLite consensus disorder prediction 836 856 - -
Mal1g1454 872 Pfam RecQ zinc-binding 619 668 IPR032284 -
Mal1g1454 872 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 151 376 IPR004589 GO:0004386|GO:0006310
Mal1g1454 872 MobiDBLite consensus disorder prediction 50 69 - -
Mal1g1454 872 SMART ultradead3 157 362 IPR014001 -
Mal1g1454 872 CDD DEXHc_RecQ 152 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1454 Mal-Chr1 18689793 18695235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1454 490 614 Eukaryotic Initiation Factors Gene Family AT5G11170 26.400 1.55e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1454 K10900 - gmx:100793222 1209.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1454 1 18689793 18695235 Mal1g1454 1 18689793 18695235 ECH