Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1452 ATGTATCATTATTCTTCAAACCAGCAGAACAACCAAAACACAAATAATAATGGCTTAGCCTTCAAGTTTCAAACATATTCAGAGGACTTTCTCTCAAAAGCCAATGCTTCAATCGATGAAAACAAAGTTCCTCCACTTAAGAATAAGACCGAGAAAGGGCAATATCACTGGGATAAAGAACAACACAGGTTATTTCTAGAGGGGCTCAAGAAGTATGGCAAGGGAAATTGGAAAAAGATTGCAGAGCATGTTGGTACAAGAAATCCAGGTCAAGTTGCTAGTCATGCTCAAAAGTATTTCCTCCGAATTAAAGAAAGTGCTGATTTATCAAAAAAGAGGAAAAGAAGAAGCAACTTTGACATTAACTTAGACATTAATAACTCATGGGATGGAAGTTTCCACCCTCTTCTCTATAGGGACAACATTTCATCTCCTCCTCCTCATCCACATGTTGAAAAACAACCAATTGTGGAGCAGATACTACAACAACTTCAACAAGCCCAAGAAATGTCTTGTTTTAATTTCTTGTTAAACATTGTAGAGTAG 546 0.3681 MYHYSSNQQNNQNTNNNGLAFKFQTYSEDFLSKANASIDENKVPPLKNKTEKGQYHWDKEQHRLFLEGLKKYGKGNWKKIAEHVGTRNPGQVASHAQKYFLRIKESADLSKKRKRRSNFDINLDINNSWDGSFHPLLYRDNISSPPPHPHVEKQPIVEQILQQLQQAQEMSCFNFLLNIVE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1452 181 ProSiteProfiles Myb-like domain profile. 49 100 IPR001005 -
Mal1g1452 181 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Mal1g1452 181 Gene3D - 53 106 - -
Mal1g1452 181 SMART sant 53 102 IPR001005 -
Mal1g1452 181 CDD SANT 57 100 IPR001005 -
Mal1g1452 181 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 104 IPR017930 -
Mal1g1452 181 ProSiteProfiles SANT domain profile. 57 104 IPR017884 -
Mal1g1452 181 PANTHER TRANSCRIPTION FACTOR KUA1 16 127 - -
Mal1g1452 181 PANTHER TRANSCRIPTION FACTOR SRM1 16 127 - -
Mal1g1452 181 Pfam Myb-like DNA-binding domain 57 100 IPR001005 -
Mal1g1452 181 SUPERFAMILY Homeodomain-like 51 105 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1452 Mal-Chr1 18679647 18680673 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal1g1452 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1452 - - mtr:MTR_1g083180 228.794