Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1449 ATGGATCAAGCAAGATCGAACAACAACATCGATGAGAATGTAGGAATTCCAGACGATTTACGTTGCAAGAGATCAGACGGGAAGCAATGGAGATGCACAGCTATGTCGATGCCAGATAAGACAGTTTGCGAGAAGCATTACATTCAAGCCAAGAAAAGAGCAGCGAATTCCGCCATGAGAGCTAATCTCAAGAAATCTAAACCTGATTCTGAAGGTTATTTGGAGAGTAAGAGTGATGATTTCGATGCTCCGCTTTCGACTGCGTTAAATAGCAATAATAATAATAATCATCGCTCTTCTTCTTCCTCTGGGAAGAAGTTGTTTGATAAGGTTTCTAAGAATCAGTTTCGTTATACACCTGAGGGTGTTAACAGTAATACAACTGCTCGTAATACTTCCAAGGTTGGTGGTGGTGATGGTGATAATTCGCCTGATCGTGTTGATGTTGATGATGAGGATGTTGTTCTCGATGAAGATAATTGGGTCTCTAATGATACGCCGCCTGGTTCTGGTGATGATTCTGCCAGGAAAATGTCAGGCAGGAGCATGGATGTCGATGCCGCTACTGGATATTCTGATGGAACGTCGGATTCTTCTCAAGAAACTGGTGGGCAGACTTGTCACCAGTGTAGGAAGAATGTTAGAGATAGAGTTACTTGGTGCCTTAAGTGTGATAGGAGAGGATATTGTGATAATTGTATATCAACATGGTATTCTGACATTTCTTTGGATGAAATTCAAAGGATATGTCCTGCATGTCGTGGTATATGCAACTGTAAAGTTTGCTTACGCAGTGATAATTCAATAAAGGTTCGGATACGTGAGATACCTGTACTGGATAAGTTACAGTATCTGCATATGTTGCTCTCATCAGTGCTTCCCGTGGTAAAGCAGATCCACCGAGAACAATGTTTTGAAGTTGAACTTGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTCCGAGGACAAAATTGAATGCAGATGAACAAATGTGCTGCAATTTATGTAGGATACCTATCACTGATTATCATCGACGCTGCCCCAATTGTTCATATGATTTGTGCCTTATTTGTTGTCGAGATCTTCGGGAAGCTACTACACATCAGAGTAAAGAACCTCAAACAGAGGAAGCAAAAACTACTGATCGAAACATGTTAAGCAAGTTTCCTCATTGGAGATCCAATGACGATGGAAGTATTCCATGCCCACCTAAGGAGCATGGTGGTTGTGGTTATTCATCATTAAACTTAAGTCGGATTTTCAAGATGAATTGGGTCGCAAAATTGGTAAAAAATGTAGAGGAAATGGTTAGTGGATGCAGAATGAGTGATGCTGATGGTCCACCAGAAACCGGATTGAATGCTTTCAGACTTTGCCAATATTCTCAAAGAGAGGCTAGCAATGATAATTATCTCTATTGTCCAACATCTGAAGAGCTCAAAACGGATGGAATTGGCATGTTTAGAATGCACTGGAAAACTGGTGAGCCTATTATCGTTAAGCAAGTATTTGACAGGTCATCCATTTCAAGCTGGGACCCATTGGTCATATGGAGAGGGATTCTGGAGACAACAGATGTGATGAAAGATGATAATAGAATGGTCAAGGCCATAGATTGCTTAGATGGGTCTGAGATTGATATTGAGCTTGGTCAGTTCATGAAAGGATATTCTGAGGGGCGTATTCTTGAAAATGGTTGGCCGCAAATATTGAAGCTGAAGGATTGGCCTTCACCTAGTGCATCTGAAGATTTTCTTTTGTACCAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTCTTAATGTTGCAGCTAAATTGCCTCATTACTCCCTACAGAATGATGTAGGACCGAAGATCTATATATCTTATGGGATTAGTGATGAACTTGGCAGAGGTGATTCTGTGACAAAACTCCACTTCAATATGCGTGACATGGTGTACCTTTTGGTTCATACAAGTGAAGCGAAGCTGAAGGACTGGCAGCGGACAAAAGTTGAAATGATGCAGAAAACTTCCAGGGAATCTGAGGCGAAAGAATTTCATGGGGATCCACATACATGTTCAAAATCACCTGATTCATCCCTTTGTACAAAAATTAATGGACTGGATTTGGAATCAGACCAGAAAGATTCGACTTTAGATCAAGGGTCTGAAGTTTATTCTAGTGCTGAAGGGAATATGGTCAATTGTGAAATTCCATTAAGACAGAATGGAGACGTCTCTGAGATAACACATCCTGGAGTTCTTTGGGATGTCTTCCGTCGGCAGGATGTTCCAAAGGTGACTGAATATTTGAAAATGCATTGGAAGGACTTTGGGAAGTCGGATGATATAGTTACATGGCCTCTTTATGGTGGAGCTATTTTTCTTGACAGACACCATAAAAGAAAGTTGAAGGAAGAATTTGGAGTGGAGCCGTGGTCATTTGAACAGAATTCGGGGGAAGCTATATTTGTTCCTGCTGGTTGCCCTTTTCAAGCAAGAAATGTTCAGTCCACTGTTCAGTTGGGCCTTGATTTCTTATCTCCTGAAAGCCTGGGAGAGGCTGTAAGATTGGCAGAAGAGGTTCGCCGCTTACCTAATGAACACGAAGCAAAGCTTCAAGTTTTGGAGGTCGGTAAGATCTCTCTTTATGCAGCAAGTTCAGCAATCAAAGAAGTTCAGAAACTTGTACTTGACCCGAAACTTGGTGAAGAGATTGGATACGGAGACCCTAATTTGACTGCTATGGTTTCTGAGAACTACGAGAAGATGTCTAAGCGGAGGCAGATTACTTGTGCTTGA 2814 0.414 MDQARSNNNIDENVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKSKPDSEGYLESKSDDFDAPLSTALNSNNNNNHRSSSSSGKKLFDKVSKNQFRYTPEGVNSNTTARNTSKVGGGDGDNSPDRVDVDDEDVVLDEDNWVSNDTPPGSGDDSARKMSGRSMDVDAATGYSDGTSDSSQETGGQTCHQCRKNVRDRVTWCLKCDRRGYCDNCISTWYSDISLDEIQRICPACRGICNCKVCLRSDNSIKVRIREIPVLDKLQYLHMLLSSVLPVVKQIHREQCFEVELEKKLRGAEIDLPRTKLNADEQMCCNLCRIPITDYHRRCPNCSYDLCLICCRDLREATTHQSKEPQTEEAKTTDRNMLSKFPHWRSNDDGSIPCPPKEHGGCGYSSLNLSRIFKMNWVAKLVKNVEEMVSGCRMSDADGPPETGLNAFRLCQYSQREASNDNYLYCPTSEELKTDGIGMFRMHWKTGEPIIVKQVFDRSSISSWDPLVIWRGILETTDVMKDDNRMVKAIDCLDGSEIDIELGQFMKGYSEGRILENGWPQILKLKDWPSPSASEDFLLYQRPEFISKLPLLQYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGISDELGRGDSVTKLHFNMRDMVYLLVHTSEAKLKDWQRTKVEMMQKTSRESEAKEFHGDPHTCSKSPDSSLCTKINGLDLESDQKDSTLDQGSEVYSSAEGNMVNCEIPLRQNGDVSEITHPGVLWDVFRRQDVPKVTEYLKMHWKDFGKSDDIVTWPLYGGAIFLDRHHKRKLKEEFGVEPWSFEQNSGEAIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRRLPNEHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGEEIGYGDPNLTAMVSENYEKMSKRRQITCA* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1449 937 MobiDBLite consensus disorder prediction 684 703 - -
Mal1g1449 937 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 202 267 IPR018866 -
Mal1g1449 937 ProSiteProfiles WRC domain profile. 16 60 IPR014977 -
Mal1g1449 937 MobiDBLite consensus disorder prediction 145 159 - -
Mal1g1449 937 SMART cupin_9 586 867 IPR003347 -
Mal1g1449 937 MobiDBLite consensus disorder prediction 83 109 - -
Mal1g1449 937 Pfam WRC 17 57 IPR014977 -
Mal1g1449 937 MobiDBLite consensus disorder prediction 64 78 - -
Mal1g1449 937 PANTHER JMJC DOMAIN PROTEIN JMJ24 8 926 - -
Mal1g1449 937 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 8 926 IPR045109 GO:0032454|GO:0033169
Mal1g1449 937 Pfam JmjC domain, hydroxylase 803 846 IPR003347 -
Mal1g1449 937 MobiDBLite consensus disorder prediction 53 206 - -
Mal1g1449 937 MobiDBLite consensus disorder prediction 189 206 - -
Mal1g1449 937 ProSiteProfiles JmjC domain profile. 579 867 IPR003347 -
Mal1g1449 937 SUPERFAMILY Clavaminate synthase-like 489 877 - -
Mal1g1449 937 MobiDBLite consensus disorder prediction 1 27 - -
Mal1g1449 937 Gene3D Cupin 468 876 - -
Mal1g1449 937 MobiDBLite consensus disorder prediction 117 138 - -
Mal1g1449 937 ProSiteProfiles Zinc finger RING-type profile. 207 254 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1449 Mal-Chr1 18606926 18613721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1449 17 57 GRF Transcription Factor Family AT3G13960 46.341 2.61e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal1g1449 JmjC 3.6e-06 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1449 K15601 - gmx:100801287 1503.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1449 1 18606926 18613721 Mal1g1449 1 18606926 18613721 ECH